Skip to content

okulev/seal

 
 

Repository files navigation

==================
Seal
==================


Seal is a suite of distributed applications for aligning short DNA reads, and
manipulating and analyzing short read alignments.  Seal applications generally run on the Hadoop
framework and are made to scale well in the amount of computing nodes available
and the amount of the data to process.  This fact makes Seal particularly well
suited for processing large data sets.

See the documentation at http://biodoop-seal.sourceforge.net/ for more information.


Install
+++++++++++

Please see the Seal documentation at http://biodoop-seal.sourceforge.net/.
Alternatively, if you have Sphinx installed you can make your own local copy
of the documentation::

  make doc

Authors
++++++++++++

Seal was written by:
 * Luca Pireddu <luca.pireddu@crs4.it>
 * Simone Leo <simone.leo@crs4.it>
 * Gianluigi Zanetti <gianluigi.zanetti@crs4.it>


License
++++++++

Seal and its components are released under the `GPLv3 license <http://www.gnu.org/licenses/gpl.html>`_.


Copyright
++++++++++

Copyright CRS4, 2011-2012.

About

Hadoop-based toolkit for processing NGS data

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages

  • Java 40.7%
  • Python 29.7%
  • C 25.8%
  • Shell 2.1%
  • JavaScript 1.0%
  • Perl 0.5%
  • Other 0.2%