Version: 0.9.4

A container image definition for the json2isatab converter from the ISA API

The ISA API is a Python 3 library that can create, manipulate, and convert ISA formatted content. The json2isatab converter takes a valid ISA-JSON document and converts it into a valid ISA-Tab formatted set of files.

• Converts ISA-JSON to ISA-Tab.

• Data Management / Study Metadata Format Conversion

• Metabolomics
• Isotopic Labelling Analysis

• MS
• NMR

• ISA Team

• David Johnson (University of Oxford)
• Philippe Rocca-Serra (University of Oxford)

• https://github.com/ISA-tools/isa-api

• https://github.com/phnmnl/container-json2isatab.git

For local individual installation:

docker pull docker-registry.phenomenal-h2020.eu/phnmnl/json2isatab

For direct docker usage:

docker run docker-registry.phenomenal-h2020.eu/phnmnl/json2isatab <path_to_isajson_file>

• Sansone, Susanna-Assunta, Rocca-Serra, Philippe, Gonzalez-Beltran, Alejandra, Johnson, David, & ISA Community. (2016, October 28). ISA Model and Serialization Specifications 1.0. Zenodo. http://doi.org/10.5281/zenodo.163640
• Sansone, Susanna-Assunta, et al. (2012, January 27). Towards interoperable bioscience data. Nature Genetics 44, 121–126. http://doi.org/10.1038/ng.1054