Analysis and simulation of images in a Transmission-Electron-Microscope.

Fitting atomic positions in 2D hexagonal materials including defects. We use a Voronoi diagram to represent bonds between nearest neighbors and perform ring statistics. To get started, execute any of the python scripts in the AtomPos directory or run

$ ./FitAtomPos tests/graphene_flower_raw.tif  tests/graphene_flower_filtered.tif