Skip to content

sanger-pathogens/panoptes

 
 

Repository files navigation

logo

This branch contains a beta version of Panoptes 2.0 which is not production ready

Version 1.6.2 is the most recent stable release

Panoptes

Join the chat at https://gitter.im/cggh/panoptes Dependency Status devDependency Status

Panoptes is a web application for exploration and visualisation of data, with special focus on genomic data. It includes:

  • Querying, sorting, plotting and templatised views of tabular data
  • Fast genome browser with tracks from the tables, including numerical, categorical and regional
  • Genotype viewer
  • Map geographic data
  • Tree viewer

All these elements are integrated to allow swift user-journeys through the data.

Deployment and data import documentation: http://panoptes.readthedocs.org

Release Notes: https://github.com/cggh/panoptes/releases

Mailing list: https://groups.google.com/forum/#!forum/panoptes-dev

For an example of a currently deployed Panoptes see the AG1000G instance at: http://www.malariagen.net/apps/ag1000g/phase1-AR3/index.html

logo

License

Panoptes © Copyright 2014, CGGH info@cggh.org

This program is free software: you can redistribute it and/or modify it under the terms of the GNU Affero General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.

This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more details.

A copy of the license is at http://opensource.org/licenses/AGPL-3.0

Shoutout

Panoptes was largely developed whilst under the magical influence of the music of Erothyme.

About

Eyes on your (genomic) data

Resources

License

Stars

Watchers

Forks

Packages

No packages published

Languages

  • JavaScript 64.4%
  • Python 27.2%
  • HTML 3.3%
  • CSS 2.4%
  • Roff 1.5%
  • Shell 1.0%
  • Other 0.2%