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MRTool

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MRTool (Meta-Regression Tool) package is designed to solve general meta-regression problem. The most common features include,

  • linear and log prediction function,
  • spline extension for covariates,
  • direct Gaussian, Uniform and Laplace prior on fixed and random effects,
  • shape constraints (monotonicity and convexity) for spline.

Advanced features include,

  • spline knots ensemble,
  • automatic covariate selection.

Installation

Required packages include,

  • basic scientific computing suite, Numpy, Scipy and Pandas,
  • main optimization engine, IPOPT,
  • customized packages, LimeTr and XSpline,
  • testing tool, Pytest.

After install the required packages, clone the repository and install MRTool.

git clone https://github.com/ihmeuw-msca/MRTool.git
cd MRTool && python setup.py install

For more information please check the documentation.

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