def on_project_info_changed(self, event):
"""
Event Handler for a property in the Project Info propgrid being changed
"""
self.project.unsaved_changes = True
event.Skip()
EVT_PROJECT_CHANGE.trigger()
def on_ammo_details_changed(self, event):
"""
Event Handler for a property in the Ammunition Details tab being changed
"""
self.project.ammo_details_unsaved = True
event.Skip()
EVT_PROJECT_CHANGE.trigger()
def reload_project(self):
self.project = Project.Project.load(self.project.filename.value)
for experiment in self.project.experiment_objects:
self.experiment_pages[experiment.name].experiment = experiment
# self.compounds_tab.project = self.project
EVT_PROJECT_CHANGE.trigger()
def on_method_changed(self, event):
"""
Event Handler for a property in the Method tab being changed
"""
print("on_method_changed")
print(self.project.method_data.ident_min_aligned_peaks)
self.project.method_unsaved = True
event.Skip()
EVT_PROJECT_CHANGE.trigger()
def remove_consolidate_data(self):
"""
Removes the consolidate data from the project file,
closes the consolidate data tab (if open) and removes it from the tree
"""
self.project.remove_consolidate()
self.project_ammo.fileNotSaved = False
self.method_tab.fileNotSaved = False
EVT_PROJECT_CHANGE.trigger()
self.compounds_tab.remove_consolidate_and_data_tabs()
# Tell ProjectNavigator to remove Consolidate for this Project
pub.sendMessage("remove_consolidate", project=self.project.name)
def _bind_events(self):
# Toolbar Events
self.Bind(wx.EVT_MENU,
self.on_new_experiment,
id=ID_New_Experiment_Single)
self.Bind(wx.EVT_MENU,
self.on_new_experiment_multiple,
id=ID_New_Experiment_Multiple)
# self.Bind(wx.EVT_TOOL, self.on_new_experiment, id=ID_New_Experiment)
# self.Bind(wx.EVT_ERASE_BACKGROUND, self.OnEraseBackground)
self.Bind(wx.EVT_SIZE, self.on_size)
self.Bind(wx.EVT_CLOSE, self.OnClose)
# self.Bind(wx.aui.EVT_AUINOTEBOOK_PAGE_CLOSED, self.on_close_project)
# WorkflowPanel
self.Bind(wx.EVT_BUTTON, self.on_quick_start_guide,
self.workflow_panel.quick_start_guide_btn)
self.Bind(wx.EVT_BUTTON, self.on_run_alignment,
self.workflow_panel.alignment_btn)
self.Bind(wx.EVT_BUTTON, self.on_run_identify,
self.workflow_panel.identify_btn)
self.Bind(wx.EVT_BUTTON, self.on_run_consolidate,
self.workflow_panel.consolidate_btn)
self.Bind(wx.EVT_BUTTON, self.on_run_analysis,
self.workflow_panel.run_analysis_btn)
# Notebook
EVT_PROJECT_CHANGE.set_receiver(self)
EVT_PROJECT_CHANGE.Bind(self.update_titles)
self.Bind(aui.EVT_AUI_PANE_CLOSE, self.on_pane_close)
# Export Dialog request exporting current page as PDF
pub.subscribe(self.on_export_pdf, "export_current_pdf")
pub.subscribe(self.on_export_project_report, "export_project_report")
# pub.subscribe(self.on_export_images, "export_current_images")
# pub.subscribe(self.on_export_csv, "export_current_csv")
# TODO: above
# Export Dialog request for exporting method and ammo_details files
pub.subscribe(self.on_export_method, "export_method")
pub.subscribe(self.on_export_ammo_details, "export_ammo_details")
# Bind events for enabling and disabling controls
pub.subscribe(self.toggle_spectrum_options, "toggle_view_tools")
pub.subscribe(self.toggle_expr_options, "toggle_expr_tools")
pub.subscribe(self.on_refresh_menus, "refresh_menus")
def remove_identification_data(self):
"""
Removes the compound identification data from the project file,
closes the appropriate tab (if open) and removes it from the tree
"""
for experiment in self.project.experiment_objects:
experiment.identification_performed = False
expr_tab = self.experiment_pages[experiment.name]
expr_tab.remove_ident_tab()
self.compounds_tab.remove_ident_tab()
self.project.store(resave_experiments=True)
self.project_ammo.fileNotSaved = False
self.method_tab.fileNotSaved = False
EVT_PROJECT_CHANGE.trigger()
pub.sendMessage("remove_identify", project=self.project.name)
def remove_alignment_data(self):
"""
Removes the alignment data from the project file,
closes the alignment data tab (if open) and removes it from the tree
"""
self.project.remove_alignment()
self.project_ammo.fileNotSaved = False
self.method_tab.fileNotSaved = False
EVT_PROJECT_CHANGE.trigger()
# Find index of alignment page
for tab_idx in range(self.notebook.GetPageCount()):
if self.notebook.GetPageText(tab_idx) == "Alignment Data":
self.notebook.RemovePage(tab_idx)
break
self.alignment_page.Destroy()
self.alignment_page = None
# Tell ProjectNavigator to remove Alignment for this Project
pub.sendMessage("remove_alignment", project=self.name)
def save(self, filename=None):
"""
Save the project, either to the filename of the project or, if given, the `filename` argument
:param filename:
:type filename:
:return: True if the operation completed successfully, False otherwise.
:rtype: bool
"""
# 1. Extract the project tarfile to a temporary directory
# 2. Move any files that were changed to a timestamped folder
# 3. In that folder, create a file called "user" containing the username of the user who made the change
# 4. In the same folder, create a file called "device" containing the hostname of the device
# 5. Save the changed files to the temporary directory
# 6. Tar the contents of the temporary directory over the project file
# 7. Get rid of the temporary directory
if filename:
self.project.filename.value = filename
# TODO: Check if the project needs to be saved
print(f"Saving changes as {self.project.filename}")
# One of the files has been changed
self.project.date_modified.value = datetime.datetime.now().timestamp()
self.project.store()
self.project_ammo.fileNotSaved = False
self.method_tab.fileNotSaved = False
EVT_PROJECT_CHANGE.trigger()
return True
def hide_peak(self, event=None):
self.selected_peak.hidden = not self.selected_peak.hidden
self.update_show_hide_peak_btn()
self.project.unsaved_changes = True
EVT_PROJECT_CHANGE.trigger()