class Ui_Form(object):
def setupUi(self,Form):
Form.setObjectName("Form")
Form.resize(730, 491)
self.layoutWidget = QtWidgets.QWidget(Form)
self.layoutWidget.setGeometry(QtCore.QRect(10, 160, 331, 221))
self.layoutWidget.setObjectName("layoutWidget")
self.gridLayout_2 = QtWidgets.QGridLayout(self.layoutWidget)
self.gridLayout_2.setContentsMargins(0, 0, 0, 0)
self.gridLayout_2.setObjectName("gridLayout_2")
self.ROI = QtWidgets.QLineEdit(self.layoutWidget)
self.ROI.setAutoFillBackground(True)
ROIListCompleter = ['leftba1-3','leftba4','leftba5','leftba6','leftba7','leftba8','leftba9','leftba10','leftba11','leftba17','leftba18','leftba19','leftba20'
,'leftba21','leftba22','leftba28','leftba36','leftba37','leftba38','leftba39','leftba40','leftba42','leftba44-45','leftba46'
'leftba47','leftcerebellartonsil','rightba1-3','rightba4','rightba5','rightba6','rightba7','rightba8','rightba9','rightba10','rightba11'
,'rightba17','rightba18','rightba19','rightba20','rightba21','rightba22','rightba28','rightba36','rightba37','rightba38','rightba39'
'rightba40','rightba42','rightba44-45','rightba46','rightba47','rightcerebellartonsil']
self.completerRoi = QCompleter(ROIListCompleter,self.ROI)
self.ROI.setCompleter(self.completerRoi)
self.ROI.setObjectName("ROI")
self.gridLayout_2.addWidget(self.ROI, 5, 1, 1, 1)
self.ROILabel = QtWidgets.QLabel(self.layoutWidget)
self.ROILabel.setObjectName("ROILabel")
self.gridLayout_2.addWidget(self.ROILabel, 5, 0, 1, 1)
self.MinimumTempLabel = QtWidgets.QLabel(self.layoutWidget)
self.MinimumTempLabel.setObjectName("MinimumTempLabel")
self.gridLayout_2.addWidget(self.MinimumTempLabel, 4, 0, 1, 1)
self.tailComboBox = QtWidgets.QComboBox(self.layoutWidget)
self.tailComboBox.setObjectName("tailComboBox")
self.tailComboBox.addItem("")
self.tailComboBox.addItem("")
self.tailComboBox.addItem("")
self.tailComboBox.addItem("")
self.gridLayout_2.addWidget(self.tailComboBox, 6, 1, 1, 1)
self.MinTempCluster = QtWidgets.QLineEdit(self.layoutWidget)
self.MinTempCluster.setObjectName("MinTempCluster")
self.gridLayout_2.addWidget(self.MinTempCluster, 4, 1, 1, 1)
self.Condition1 = QtWidgets.QLineEdit(self.layoutWidget)
self.Condition1.setAutoFillBackground(True)
self.Condition1.setObjectName("Condition1")
self.gridLayout_2.addWidget(self.Condition1, 0, 1, 1, 1)
self.TailLabel = QtWidgets.QLabel(self.layoutWidget)
self.TailLabel.setObjectName("TailLabel")
self.gridLayout_2.addWidget(self.TailLabel, 6, 0, 1, 1)
self.Condition1Label = QtWidgets.QLabel(self.layoutWidget)
self.Condition1Label.setObjectName("Condition1Label")
self.gridLayout_2.addWidget(self.Condition1Label, 0, 0, 1, 1)
#self.Prestimulus = QtWidgets.QLineEdit(self.layoutWidget)
#self.Prestimulus.setObjectName("Prestimulus")
#self.gridLayout_2.addWidget(self.Prestimulus, 3, 1, 1, 1)
#self.PrestimLabel = QtWidgets.QLabel(self.layoutWidget)
#self.PrestimLabel.setObjectName("PrestimLabel")
self.Prestimulus = 0
#self.gridLayout_2.addWidget(self.PrestimLabel, 3, 0, 1, 1)
self.StartTime = QtWidgets.QLineEdit(self.layoutWidget)
self.StartTime.setMaxLength(1000)
self.StartTime.setObjectName("StartTime")
self.gridLayout_2.addWidget(self.StartTime, 2, 1, 1, 1)
self.FindROI = QtWidgets.QPushButton(self.layoutWidget)
self.FindROI.setObjectName("FindROI")
self.gridLayout_2.addWidget(self.FindROI, 5, 2, 1, 1)
self.StartTimelabel = QtWidgets.QLabel(self.layoutWidget)
self.StartTimelabel.setObjectName("StartTimelabel")
self.gridLayout_2.addWidget(self.StartTimelabel, 2, 0, 1, 1)
self.BadSubjects = QtWidgets.QLineEdit(self.layoutWidget)
self.BadSubjects.setAutoFillBackground(False)
self.BadSubjects.setObjectName("BadSubjects")
self.gridLayout_2.addWidget(self.BadSubjects, 1, 1, 1, 1)
self.BadSubjectsLabel = QtWidgets.QLabel(self.layoutWidget)
self.BadSubjectsLabel.setObjectName("BadSubjectsLabel")
self.gridLayout_2.addWidget(self.BadSubjectsLabel, 1, 0, 1, 1)
self.layoutWidget1 = QtWidgets.QWidget(Form)
self.layoutWidget1.setGeometry(QtCore.QRect(340, 160, 292, 151))
self.layoutWidget1.setObjectName("layoutWidget1")
self.gridLayout_3 = QtWidgets.QGridLayout(self.layoutWidget1)
self.gridLayout_3.setContentsMargins(0, 0, 0, 0)
self.gridLayout_3.setObjectName("gridLayout_3")
self.PthreshVal = QtWidgets.QLineEdit(self.layoutWidget1)
self.PthreshVal.setObjectName("PthreshVal")
self.gridLayout_3.addWidget(self.PthreshVal, 2, 1, 1, 1)
self.EndTimeLabel = QtWidgets.QLabel(self.layoutWidget1)
self.EndTimeLabel.setObjectName("EndTimeLabel")
self.gridLayout_3.addWidget(self.EndTimeLabel, 1, 0, 1, 1)
self.Condition2 = QtWidgets.QLineEdit(self.layoutWidget1)
self.Condition2.setObjectName("Condition2")
self.gridLayout_3.addWidget(self.Condition2, 0, 1, 1, 1)
self.Condition2Label = QtWidgets.QLabel(self.layoutWidget1)
self.Condition2Label.setObjectName("Condition2Label")
self.gridLayout_3.addWidget(self.Condition2Label, 0, 0, 1, 1)
#self.MAXFDR = QtWidgets.QLineEdit(self.layoutWidget1)
#self.MAXFDR.setObjectName("MAXFDR")
#self.gridLayout_3.addWidget(self.MAXFDR, 3, 1, 1, 1)
self.MAXFDR = 0
self.PtreshLabel = QtWidgets.QLabel(self.layoutWidget1)
self.PtreshLabel.setObjectName("PtreshLabel")
self.gridLayout_3.addWidget(self.PtreshLabel, 2, 0, 1, 1)
self.NumberPermutaiton = QtWidgets.QLineEdit(self.layoutWidget1)
self.NumberPermutaiton.setObjectName("NumberPermutaiton")
self.gridLayout_3.addWidget(self.NumberPermutaiton, 4, 1, 1, 1)
#self.MAxFDRLabel = QtWidgets.QLabel(self.layoutWidget1)
#self.MAxFDRLabel.setObjectName("MAxFDRLabel")
#self.gridLayout_3.addWidget(self.MAxFDRLabel, 3, 0, 1, 1)
self.NumberPermLabel = QtWidgets.QLabel(self.layoutWidget1)
self.NumberPermLabel.setObjectName("NumberPermLabel")
self.gridLayout_3.addWidget(self.NumberPermLabel, 4, 0, 1, 1)
self.EndTime = QtWidgets.QLineEdit(self.layoutWidget1)
self.EndTime.setObjectName("EndTime")
self.EndTime.setMaxLength(1000)
self.gridLayout_3.addWidget(self.EndTime, 1, 1, 1, 1)
self.layoutWidget2 = QtWidgets.QWidget(Form)
self.layoutWidget2.setGeometry(QtCore.QRect(10, 80, 271, 62))
self.layoutWidget2.setObjectName("layoutWidget2")
self.gridLayout_4 = QtWidgets.QGridLayout(self.layoutWidget2)
self.gridLayout_4.setContentsMargins(0, 0, 0, 0)
self.gridLayout_4.setObjectName("gridLayout_4")
self.gridLayout = QtWidgets.QGridLayout()
self.gridLayout.setObjectName("gridLayout")
self.ProjecTRoot = QtWidgets.QLineEdit(self.layoutWidget2)
self.ProjecTRoot.setObjectName("ProjecTRoot")
self.gridLayout.addWidget(self.ProjecTRoot, 0, 0, 1, 1)
self.FindpushButton = QtWidgets.QPushButton(self.layoutWidget2)
self.FindpushButton.setObjectName("FindpushButton")
self.gridLayout.addWidget(self.FindpushButton, 0, 1, 1, 1)
self.gridLayout_4.addLayout(self.gridLayout, 0, 1, 1, 1)
self.ProjectRoot = QtWidgets.QLabel(self.layoutWidget2)
self.ProjectRoot.setObjectName("ProjectRoot")
self.gridLayout_4.addWidget(self.ProjectRoot, 0, 0, 1, 1)
self.label = QtWidgets.QLabel(Form)
self.label.setGeometry(QtCore.QRect(10, 0, 481, 31))
font = QtGui.QFont()
font.setPointSize(20)
self.label.setFont(font)
self.label.setObjectName("label")
self.cancel = QtWidgets.QPushButton(Form)
self.cancel.setGeometry(QtCore.QRect(330, 380, 169, 32))
self.cancel.setObjectName("cancel")
self.Ok = QtWidgets.QPushButton(Form)
self.Ok.setGeometry(QtCore.QRect(500, 380, 126, 32))
self.Ok.setObjectName("Ok")
self.widget = QtWidgets.QWidget(Form)
self.widget.setGeometry(QtCore.QRect(10, 140, 261, 23))
self.widget.setObjectName("widget")
self.horizontalLayout = QtWidgets.QHBoxLayout(self.widget)
self.horizontalLayout.setContentsMargins(0, 0, 0, 0)
self.horizontalLayout.setObjectName("horizontalLayout")
self.layoutWidget.raise_()
self.layoutWidget.raise_()
self.layoutWidget.raise_()
self.BadSubjectsLabel.raise_()
self.BadSubjects.raise_()
self.BadSubjects.raise_()
self.ProjectRoot.raise_()
self.label.raise_()
self.cancel.raise_()
self.Ok.raise_()
self.progress = QProgressBar(self)
self.progress.setGeometry(250, 420, 326, 102)
self.table = QTableWidget()
#self.progress.isVisible = "False"
self.retranslateUi(Form)
QtCore.QMetaObject.connectSlotsByName(Form)
self.cancel.clicked.connect(self.close)
Rootdirectory = self.FindpushButton.clicked.connect(self.FindFolder)
RoiFile = self.FindROI.clicked.connect(self.fileOpenROI)
#GET Dictionary for autocompletion of condition names
self.Ok.clicked.connect(self.RunAnalysis)
Form.setTabOrder(self.ProjecTRoot, self.FindpushButton)
Form.setTabOrder(self.FindpushButton,self.Condition1)
Form.setTabOrder(self.Condition1, self.Condition2)
Form.setTabOrder(self.Condition2, self.BadSubjects)
Form.setTabOrder(self.BadSubjects, self.StartTime)
Form.setTabOrder(self.StartTime, self.EndTime)
#Form.setTabOrder(self.EndTime, self.Prestimulus)
#Form.setTabOrder(self.Prestimulus, self.PthreshVal)
Form.setTabOrder(self.EndTime, self.PthreshVal)
Form.setTabOrder(self.PthreshVal, self.MinTempCluster)
#Form.setTabOrder(self.MinTempCluster, self.MAXFDR)
#Form.setTabOrder(self.MAXFDR, self.ROI)
Form.setTabOrder(self.MinTempCluster, self.ROI)
Form.setTabOrder(self.ROI, self.NumberPermutaiton)
Form.setTabOrder(self.NumberPermutaiton, self.ROI)
Form.setTabOrder(self.ROI, self.tailComboBox)
Form.setTabOrder(self.tailComboBox, self.NumberPermutaiton)
def fileOpenROI(self):
fn, _ = QFileDialog.getOpenFileName(self, "Open File...", None,
"label-Files (*.txt *.label);;All Files (*)")
self.ROI.setText(fn)
def FindFolder(self):
self.directory = QtWidgets.QFileDialog.getExistingDirectory(self, "Find Files",
QtCore.QDir.currentPath())
self.ProjecTRoot.setText(self.directory)
strList = []
for root, dirs, files in os.walk(self.directory):
strList.append(dirs)
strList1 = str("Germany;Russia;France;Norway").split(";")
self.completer = QCompleter(strList[0],self.Condition1)
self.Condition1.setCompleter(self.completer)
self.Condition2.setCompleter(self.completer)
return self.directory, self.completer
##### get all data entered in the form and pass it to the ttest function
def RunAnalysis(self):
condition1Name = self.Condition1.text()
condition2Name = self.Condition2.text()
startTime = self.StartTime.text()
endTime = self.EndTime.text()
#presTim = self.Prestimulus.text()
presTim = self.Prestimulus
PThresh = self.PthreshVal.text()
minTemporalCluster = self.MinTempCluster.text()
#maxFDR = self.MAXFDR.text()
maxFDR = self.MAXFDR
numPerm = self.NumberPermutaiton.text()
anlsysTail = self.tailComboBox.currentData()
ROI = self.ROI.text()
root = self.ProjecTRoot.text()
self.progress.isVisible = "True"
self.progress.isTextVisible = "True"
self.progress.format = "%p%"
self.completed = 0
self.Results = ""
while self.completed < 100:
self.completed += 0.10
self.progress.setValue(self.completed)
self.progress.value = self.completed
self.progress.isTextVisible = "True"
#pass setting from UI to statistical function
#QObject.connectNotify(self.progressBar, pyqtSignal(""), self.progressBar.setValue)
self.Results = PThresholdTempSourceTTest(root, condition1Name, condition2Name,startTime,endTime, presTim,PThresh,minTemporalCluster, numPerm, anlsysTail, ROI)
resultsAll = self.Results
#get conditions names
cluster_table = self.Results.clusters.as_table()
resultsForPlot = self.Results._default_plot_obj
Cond1 = resultsForPlot[0]
Cond1Name = Cond1.name
Cond2 = resultsForPlot[1]
Cond2Name = Cond2.name
cond1Data = Cond1.x
cond2Data = Cond2.x
XAxisVals = Cond1.dims # X AXIS Y AXIS THEN PLOT
Startx = XAxisVals[0]
startx = (Startx.tmin)*1000
endx = (Startx.tmax)*1000
stepx = (Startx.tstep)*1000
name = Startx.name
nsamples = Startx.nsamples
from PyQt5 import QtCore, QtGui, QtWidgets
from mainwindow import Ui_MainWindow
self.Results = self.Results.clusters
#self.main_widget = QWidget(mainwindow.Ui_MainWindow.dockPlot())
self.main_widget = QtWidgets.QDockWidget()
#self.main_widget = QtWidgets.QWidget()
l = QVBoxLayout(self.main_widget)
self.sc = MyStaticMplCanvas(self.main_widget, width=5, height=4, dpi=100)
#dc = MyDynamicMplCanvas(self.main_widget, width=5, height=4, dpi=100)
#MyStaticMplCanvas.compute_initial_figure(self.main_widget)
MyStaticMplCanvas.compute_initial_figure1(self.sc,startx,endx,stepx,cond1Data,cond2Data, condition1Name,condition2Name)
l.addWidget(self.sc)
#PLotWidget = QWidget()
#PLotWidget = l.widget()
#DockPlot = QDockWidget.create
#Ui_MainWindow.dockPlot
#Ui_MainWindow
#Ui_MainWindow.addDockWidget(QtCore.Qt.DockWidgetArea(1), l)
#self.main_widget.show()
self.sc.cond1 = cond1Data
self.sc.cond2 = cond2Data
self.sc.start = startx
self.sc.end = endx
self.sc.step = stepx
#Extract epoch time for x axis for each condition
#Extract y axis values
#print(self.Results.clusters)
#x = self.Results.clusters[1, 'cluster'].x
#d = self.Results.clusters[0, 'cluster'].any()
#data = {'ClusterID':['1','2','3'], 'n_sources':['4','5','6'], 'hemisphere':['7','8','9'],'Start Time':['7','8','9'],'End Time':['7','8','9'],'Duration':['7','8','9'],'P-value':['7','8','9']}
durations = []
ids=[]
ps=[]
sigs=[]
tstarts=[]
tstops=[]
cluster = self.Results.get('cluster')
#len = self.Results._len_
duration = self.Results.get('duration')
for _len_ in duration:
durations.append(str(int(_len_*1000)))
index = 1
id = self.Results.get('id')
for _len_ in id:
#ids.append(str(_len_))
ids.append(str(index))
index = index +1
p = self.Results.get('p')
for _len_ in p:
ps.append(str(_len_))
sig = self.Results.get('sig')
for _len_ in sig:
sigs.append(str(_len_))
tstart = self.Results.get('tstart')
for _len_ in tstart:
tstarts.append(str(int(_len_*1000)))
tstop = self.Results.get('tstop')
for _len_ in tstop:
tstops.append(str(int(_len_*1000)))
v = self.Results.get('v')
#get header
data = {'1 ClusterID':ids, '2 Duration':durations, '3 Start time':tstarts,'4 End Time':tstops, '5 P-value': ps,'6 Sig':sigs} #,'Duration':['7','8','9'],'P-value':['7','8','9']}
self.table = MyTable(self.sc,data, len(durations),6)#,startx,endx,stepx,cond1Data,cond2Data)
#l.addWidget(self.sc)
#from mainwindow import Ui_MainWindow as mainwind
from MRAT_MainWindow import MainWindow as mainwind
#Ui_MainWindow.__init__(self)
#self.setupUi(self)
m = mainwind()
#m.dockResults.setWidget(m.Resultcontent)
#m = mainwind()
m.Resultcontent = self.table
m.Resultcontent = self.table
m.dockResults.setWidget(m.Resultcontent)
'''l1 = QVBoxLayout(m.dock)
self.sc1 = MyStaticMplCanvas(m.dock, width=5, height=4, dpi=100)
#dc = MyDynamicMplCanvas(self.main_widget, width=5, height=4, dpi=100)
#MyStaticMplCanvas.compute_initial_figure(self.main_widget)
MyStaticMplCanvas.compute_initial_figure1(self.sc1,startx,endx,stepx,cond1Data,cond2Data, condition1Name,condition2Name)
l1.addWidget(self.sc1)
m.dock.show()'''
m.Plotcontent = l
#m.dock.set
m.dock.setWidget(m.Plotcontent)
#m.dock.show()
m.addDockWidget(Qt.RightDockWidgetArea, m.dockResults)
m.addAction(m.dockResults.toggleViewAction())
#####
#m.dockw = QtWidgets.QDockWidget()
#self.main_widget = QtWidgets.QWidget()
'''l = QVBoxLayout(m.dock)
self.sc = MyStaticMplCanvas(m.dock, width=5, height=4, dpi=100)
#dc = MyDynamicMplCanvas(self.main_widget, width=5, height=4, dpi=100)
#MyStaticMplCanvas.compute_initial_figure(self.main_widget)
MyStaticMplCanvas.compute_initial_figure1(self.sc,startx,endx,stepx,cond1Data,cond2Data, condition1Name,condition2Name)
l.addWidget(self.sc)
m.addDockWidget(Qt.RightDockWidgetArea, m.dock)
m.addAction(m.dockw.toggleViewAction())'''
########
########
#m.update()
#m.close()
m.show()
'''MainWindow.dockResults = mainwind.dockResults()
mainwind1.ResultsContent = self.table
mainwind1.dockResults = QtWidgets.QDockWidget()
mainwind1.dockResults.setAllowedAreas(Qt.LeftDockWidgetArea | Qt.RightDockWidgetArea)
#mainwind.tableMain = self.table
#mainwind.dockResults.setWidget(self.table)
#mainwind.retranslateUi()
#self.table.show()
#self.table.setMouseTracking(True)
#self.table.itemClicked()'''
def retranslateUi(self, Form):
_translate = QtCore.QCoreApplication.translate
Form.setWindowTitle(_translate("Form", "Permutation Test For a Temporal t-test analysis"))
Form.setToolTip(_translate("Form", "PThreshold T-test for Temporal Data"))
self.ROI.setToolTip(_translate("Form", "Please enter the prestimulus interval"))
self.ROILabel.setText(_translate("Form", "ROI"))
self.MinimumTempLabel.setText(_translate("Form", "Minimum Temporal Cluster"))
self.tailComboBox.setItemText(0, _translate("Form", "Please choose an option"))
self.tailComboBox.setItemText(1, _translate("Form", "Both"))
self.tailComboBox.setItemText(2, _translate("Form", "Left tail"))
self.tailComboBox.setItemText(3, _translate("Form", "Right Tail"))
self.MinTempCluster.setToolTip(_translate("Form", "Please enter the minimum temporal cluster duration in ms"))
self.Condition1.setToolTip(_translate("Form", "Please enter the first condition's name just enter the first letters"))
self.TailLabel.setText(_translate("Form", "Tail"))
self.Condition1Label.setText(_translate("Form", "Condition 1 :"))
#self.Prestimulus.setToolTip(_translate("Form", "Please enter the prestimulus interval in ms"))
#self.PrestimLabel.setText(_translate("Form", "Prestimulus"))
self.StartTime.setToolTip(_translate("Form", "Enter the start time in ms"))
#self.StartTime.setInputMask(_translate("Form", "0"))
self.FindROI.setText(_translate("Form", "find"))
self.StartTimelabel.setText(_translate("Form", "Start Time:"))
self.BadSubjects.setToolTip(_translate("Form", "Please enter the badsubjects names separated by , "))
self.BadSubjectsLabel.setText(_translate("Form", "BadSubjects"))
self.PthreshVal.setToolTip(_translate("Form", "Please Enter the PThreshold value"))
self.EndTimeLabel.setText(_translate("Form", "End Time"))
self.Condition2.setToolTip(_translate("Form", "Please enter the second condition's name"))
self.Condition2Label.setText(_translate("Form", "Condition 2:"))
#self.MAXFDR.setToolTip(_translate("Form", "Please enter the prestimulus interval"))
self.PtreshLabel.setText(_translate("Form", "P_value threshold"))
self.NumberPermutaiton.setToolTip(_translate("Form", "Please enter the number of permutation"))
#self.MAxFDRLabel.setText(_translate("Form", "Max FDR Rate"))
self.NumberPermLabel.setText(_translate("Form", "Number Of Permutations"))
self.EndTime.setToolTip(_translate("Form", "enter the ending time "))
self.FindpushButton.setText(_translate("Form", "find"))
self.ProjectRoot.setText(_translate("Form", "Conditions Root :"))
self.label.setText(_translate("Form", "Temporal t-test analysis for sources data "))
self.cancel.setText(_translate("Form", "Cancel"))
self.Ok.setText(_translate("Form", "Run Analysis"))
def getResults(self):
return self.table
def RunAnalysis(self):
condition1Name = self.Condition1.text()
condition2Name = self.Condition2.text()
startTime = self.StartTime.text()
endTime = self.EndTime.text()
#presTim = self.Prestimulus.text()
presTim = self.Prestimulus
PThresh = self.PthreshVal.text()
minTemporalCluster = self.MinTempCluster.text()
#maxFDR = self.MAXFDR.text()
maxFDR = self.MAXFDR
numPerm = self.NumberPermutaiton.text()
anlsysTail = self.tailComboBox.currentData()
ROI = self.ROI.text()
root = self.ProjecTRoot.text()
self.progress.isVisible = "True"
self.progress.isTextVisible = "True"
self.progress.format = "%p%"
self.completed = 0
self.Results = ""
while self.completed < 100:
self.completed += 0.10
self.progress.setValue(self.completed)
self.progress.value = self.completed
self.progress.isTextVisible = "True"
#pass setting from UI to statistical function
#QObject.connectNotify(self.progressBar, pyqtSignal(""), self.progressBar.setValue)
self.Results = PThresholdTempSourceTTest(root, condition1Name, condition2Name,startTime,endTime, presTim,PThresh,minTemporalCluster, numPerm, anlsysTail, ROI)
resultsAll = self.Results
#get conditions names
cluster_table = self.Results.clusters.as_table()
resultsForPlot = self.Results._default_plot_obj
Cond1 = resultsForPlot[0]
Cond1Name = Cond1.name
Cond2 = resultsForPlot[1]
Cond2Name = Cond2.name
cond1Data = Cond1.x
cond2Data = Cond2.x
XAxisVals = Cond1.dims # X AXIS Y AXIS THEN PLOT
Startx = XAxisVals[0]
startx = (Startx.tmin)*1000
endx = (Startx.tmax)*1000
stepx = (Startx.tstep)*1000
name = Startx.name
nsamples = Startx.nsamples
from PyQt5 import QtCore, QtGui, QtWidgets
from mainwindow import Ui_MainWindow
self.Results = self.Results.clusters
#self.main_widget = QWidget(mainwindow.Ui_MainWindow.dockPlot())
self.main_widget = QtWidgets.QDockWidget()
#self.main_widget = QtWidgets.QWidget()
l = QVBoxLayout(self.main_widget)
self.sc = MyStaticMplCanvas(self.main_widget, width=5, height=4, dpi=100)
#dc = MyDynamicMplCanvas(self.main_widget, width=5, height=4, dpi=100)
#MyStaticMplCanvas.compute_initial_figure(self.main_widget)
MyStaticMplCanvas.compute_initial_figure1(self.sc,startx,endx,stepx,cond1Data,cond2Data, condition1Name,condition2Name)
l.addWidget(self.sc)
#PLotWidget = QWidget()
#PLotWidget = l.widget()
#DockPlot = QDockWidget.create
#Ui_MainWindow.dockPlot
#Ui_MainWindow
#Ui_MainWindow.addDockWidget(QtCore.Qt.DockWidgetArea(1), l)
#self.main_widget.show()
self.sc.cond1 = cond1Data
self.sc.cond2 = cond2Data
self.sc.start = startx
self.sc.end = endx
self.sc.step = stepx
#Extract epoch time for x axis for each condition
#Extract y axis values
#print(self.Results.clusters)
#x = self.Results.clusters[1, 'cluster'].x
#d = self.Results.clusters[0, 'cluster'].any()
#data = {'ClusterID':['1','2','3'], 'n_sources':['4','5','6'], 'hemisphere':['7','8','9'],'Start Time':['7','8','9'],'End Time':['7','8','9'],'Duration':['7','8','9'],'P-value':['7','8','9']}
durations = []
ids=[]
ps=[]
sigs=[]
tstarts=[]
tstops=[]
cluster = self.Results.get('cluster')
#len = self.Results._len_
duration = self.Results.get('duration')
for _len_ in duration:
durations.append(str(int(_len_*1000)))
index = 1
id = self.Results.get('id')
for _len_ in id:
#ids.append(str(_len_))
ids.append(str(index))
index = index +1
p = self.Results.get('p')
for _len_ in p:
ps.append(str(_len_))
sig = self.Results.get('sig')
for _len_ in sig:
sigs.append(str(_len_))
tstart = self.Results.get('tstart')
for _len_ in tstart:
tstarts.append(str(int(_len_*1000)))
tstop = self.Results.get('tstop')
for _len_ in tstop:
tstops.append(str(int(_len_*1000)))
v = self.Results.get('v')
#get header
data = {'1 ClusterID':ids, '2 Duration':durations, '3 Start time':tstarts,'4 End Time':tstops, '5 P-value': ps,'6 Sig':sigs} #,'Duration':['7','8','9'],'P-value':['7','8','9']}
self.table = MyTable(self.sc,data, len(durations),6)#,startx,endx,stepx,cond1Data,cond2Data)
#l.addWidget(self.sc)
#from mainwindow import Ui_MainWindow as mainwind
from MRAT_MainWindow import MainWindow as mainwind
#Ui_MainWindow.__init__(self)
#self.setupUi(self)
m = mainwind()
#m.dockResults.setWidget(m.Resultcontent)
#m = mainwind()
m.Resultcontent = self.table
m.Resultcontent = self.table
m.dockResults.setWidget(m.Resultcontent)
'''l1 = QVBoxLayout(m.dock)
self.sc1 = MyStaticMplCanvas(m.dock, width=5, height=4, dpi=100)
#dc = MyDynamicMplCanvas(self.main_widget, width=5, height=4, dpi=100)
#MyStaticMplCanvas.compute_initial_figure(self.main_widget)
MyStaticMplCanvas.compute_initial_figure1(self.sc1,startx,endx,stepx,cond1Data,cond2Data, condition1Name,condition2Name)
l1.addWidget(self.sc1)
m.dock.show()'''
m.Plotcontent = l
#m.dock.set
m.dock.setWidget(m.Plotcontent)
#m.dock.show()
m.addDockWidget(Qt.RightDockWidgetArea, m.dockResults)
m.addAction(m.dockResults.toggleViewAction())
#####
#m.dockw = QtWidgets.QDockWidget()
#self.main_widget = QtWidgets.QWidget()
'''l = QVBoxLayout(m.dock)
self.sc = MyStaticMplCanvas(m.dock, width=5, height=4, dpi=100)
#dc = MyDynamicMplCanvas(self.main_widget, width=5, height=4, dpi=100)
#MyStaticMplCanvas.compute_initial_figure(self.main_widget)
MyStaticMplCanvas.compute_initial_figure1(self.sc,startx,endx,stepx,cond1Data,cond2Data, condition1Name,condition2Name)
l.addWidget(self.sc)
m.addDockWidget(Qt.RightDockWidgetArea, m.dock)
m.addAction(m.dockw.toggleViewAction())'''
########
########
#m.update()
#m.close()
m.show()
'''MainWindow.dockResults = mainwind.dockResults()
