def __init__(self) -> None:
super().__init__()
self.setMinimumSize(640, 480)
self._build_menus()
self.view = Qt3DExtras.Qt3DWindow()
self.view.defaultFrameGraph().setClearColor(QColor(0, 0, 0))
self.widget = QWidget.createWindowContainer(self.view)
self.sphere_vc = SphereVC(self.view)
self.setCentralWidget(self.widget)
self._textures = AlbedoTextureMapper()
def __init__(self, args, parent=None):
super().__init__(parent)
##############################################################################
# UI初期化処理
self.ui = MainWindowUi.loader(os.path.join(os.getcwd(), 'ui/main.ui'))
self.setWindowTitle('self.viewer test')
self.setCentralWidget(self.ui.widgets)
self.view = Qt3DExtras.Qt3DWindow()
self.view.defaultFrameGraph().setClearColor(QtGui.QColor(0, 0, 0))
self.container = QWidget.createWindowContainer(self.view)
screen_size = self.view.screen().size()
self.ui.viewer.addWidget(self.container)
self.container.setMinimumSize(QtCore.QSize(400, 600))
self.container.setMaximumSize(screen_size)
# QSize screenSize = self.view -> screen() -> size();
# container -> setMinimumSize(QSize(200, 100));
# container -> setMaximumSize(screenSize);
# vLayout -> setAlignment(Qt: : AlignTop);
# hLayout -> addWidget(container, 1);
# hLayout -> addLayout(vLayout);
# input_aspect = Qt3DInput.QInputAspect()
# self.view.registerAspect(input_aspect)
# root entity
self.root_entity: Qt3DCore.QEntity = Qt3DCore.QEntity()
# draw grid and axis
"""
self.x_axis: Qt3DRender.QGeometry = Qt3DRender.QGeometry(self.root_entity)
x_axis_pos: QtCore.QByteArray = QtCore.QByteArray()
x_axis_pos.append(0)
x_axis_pos.append(0)
x_axis_pos.append(0)
x_axis_pos.append(10)
x_axis_pos.append(0)
x_axis_pos.append(0)
x_axis_buf: Qt3DRender.QBuffer = Qt3DRender.QBuffer(self.x_axis)
x_axis_buf.setData(x_axis_pos)
x_axis_attr: Qt3DRender.QAttribute = Qt3DRender.QAttribute(self.x_axis)
x_axis_attr.setVertexBaseType(Qt3DRender.QAttribute.Float)
x_axis_attr.setVertexSize(3)
x_axis_attr.setAttributeType(Qt3DRender.QAttribute.VertexAttribute)
x_axis_attr.setBuffer(x_axis_buf)
x_axis_attr.setByteStride(3)
x_axis_attr.setCount(2)
self.x_axis.addAttribute(x_axis_attr)
"""
test_mtl = Qt3DExtras.QTextureMaterial(self.root_entity)
self.test = Qt3DCore.QEntity(self.root_entity)
self.test_mesh: Qt3DExtras.QTorusMesh = Qt3DExtras.QTorusMesh()
self.test_mesh.setRadius(5)
self.test_mesh.setMinorRadius(1)
self.test_mesh.setRings(100)
self.test_mesh.setSlices(20)
self.test_tr = Qt3DCore.QTransform()
self.test_tr.setTranslation(QtGui.QVector3D(0, 0, 0))
# test_tr.setScale3D()
self.test.addComponent(self.test_mesh)
self.test.addComponent(self.test_tr)
self.test.addComponent(self.test_mtl)
# camera entity
camera_entity: Qt3DRender.QCamera = self.view.camera()
camera_entity.lens().setPerspectiveProjection(45.0, 16.0 / 9.0, 0.1, 1000.0)
camera_entity.setPosition(QtGui.QVector3D(0, 0, 20.0))
camera_entity.setUpVector(QtGui.QVector3D(0, 1, 0))
camera_entity.setViewCenter(QtGui.QVector3D(0, 0, 0))
light_entity = Qt3DCore.QEntity(self.root_entity)
light = Qt3DRender.QPointLight(light_entity)
light.setColor("white")
light.setIntensity(1)
light_entity.addComponent(light)
light_transform = Qt3DCore.QTransform(light_entity)
light_transform.setTranslation(camera_entity.position())
light_entity.addComponent(light_transform)
# for camera controls
cam_controller = Qt3DExtras.QFirstPersonCameraController(self.root_entity)
cam_controller.setCamera(camera_entity)
# set root object of the scene
self.view.setRootEntity(self.root_entity)
def __init__(self, parent, fs_subject="sample"):
super(MeshDisplayWidget, self).__init__(parent)
self.config = parent.config
self.fs_subject = fs_subject
self.view = Qt3DExtras.Qt3DWindow()
self.view.defaultFrameGraph().setClearColor(QtGui.QColor("#4d4d4f"))
self.container = QtWidgets.QWidget.createWindowContainer(self.view, self)
screen_size = self.view.screen().size()
self.container.setMinimumSize(QtCore.QSize(600, 100))
self.container.setMaximumSize(screen_size)
#h_layout = QtWidgets.QHBoxLayout(self)
#h_layout.addWidget(self.container)
self.addWidget(self.container)
self.tableView = QtWidgets.QTableView(self)
self.tableView.setObjectName("tableView")
v_layout = QtWidgets.QVBoxLayout()
v_layout.addWidget(self.tableView)
self.overlay_btn = QtWidgets.QPushButton("Update and overlay digitized points")
self.overlay_btn.clicked.connect(self.update_acquisition_overlay)
v_layout.addWidget(self.overlay_btn)
subject_name_layout = QtWidgets.QHBoxLayout()
subject_name_layout.addWidget(QtWidgets.QLabel("Subject name:"))
self.subject_name_wgt = QtWidgets.QComboBox()
subject_name_layout.addWidget(self.subject_name_wgt)
self.new_subject_wgt = QtWidgets.QPushButton("New subject")
self.new_subject_wgt.clicked.connect(self.new_subject)
subject_name_layout.addWidget(self.new_subject_wgt)
self.mute_sound_wgt = QtWidgets.QCheckBox("Mute sound")
subject_name_layout.addWidget(self.mute_sound_wgt)
v_layout.addLayout(subject_name_layout)
if "subject_dir" not in self.config["DEFAULT"]:
self.config["DEFAULT"]["subject_dir"] = str(Path(__file__).parent.absolute() / "subjects_data")
subject_dir_layout = QtWidgets.QHBoxLayout()
subject_dir_layout.addWidget(QtWidgets.QLabel("Subject dir:"))
self.subject_dir_wgt = QtWidgets.QLineEdit(self.config["DEFAULT"]["subject_dir"])
self.subject_dir_wgt.setReadOnly(False)
subject_dir_layout.addWidget(self.subject_dir_wgt)
select_subject_dir_btn = QtWidgets.QPushButton("...")
subject_dir_layout.addWidget(select_subject_dir_btn)
select_subject_dir_btn.clicked.connect(self.open_subject_dir_dlg)
v_layout.addLayout(subject_dir_layout)
self.subject_dir_wgt.textChanged.connect(self.set_subject_dir)
if not Path(self.config["DEFAULT"]["subject_dir"]).exists():
msgBox = QtWidgets.QMessageBox()
msgBox.setIcon(QtWidgets.QMessageBox.Information)
msgBox.setText(f"The chosen subject directory (i.e. {self.config['DEFAULT']['subject_dir']}) does not "
"exist. Do you want to create it or to select a new directory?")
msgBox.setWindowTitle("Non-existent subject directory")
button_create = msgBox.addButton("Create it!", QtWidgets.QMessageBox.YesRole);
msgBox.addButton("Select a different directory", QtWidgets.QMessageBox.NoRole)
msgBox.exec_()
if msgBox.clickedButton() == button_create:
Path(self.config["DEFAULT"]["subject_dir"]).mkdir(exist_ok=True, parents=True)
else:
self.open_subject_dir_dlg()
#h_layout.addLayout(v_layout)
v_layout_widget = QtWidgets.QWidget(self)
v_layout_widget.setLayout(v_layout)
self.addWidget(v_layout_widget)
self.data = QtCore.QUrl.fromLocalFile(str(Path(__file__).parent.absolute() / f"{self.fs_subject}_head.obj"))
self.root_entity = Qt3DCore.QEntity()
self.material = Qt3DExtras.QPhongMaterial()
self.material.setDiffuse(QtGui.QColor(254, 254, 254))
self.camera = self.view.camera()
self.camera.lens().setPerspectiveProjection(400.0, 16.0/9.0, 100, 1200.0)
self.camera.setPosition(QtGui.QVector3D(0, 500, 0))
self.camera.setUpVector(QtGui.QVector3D(0, 0, 1))
self.lightEntities = {}
self.lights = {}
self.lightTransforms = {}
for trans_x in [200, -200]:
for trans_y in [200, -200]:
self.lightEntities[(trans_x, trans_y)] = Qt3DCore.QEntity(self.root_entity)
self.lights[(trans_x, trans_y)] = Qt3DRender.QPointLight(self.lightEntities[(trans_x, trans_y)])
self.lights[(trans_x, trans_y)].setColor("white")
self.lights[(trans_x, trans_y)].setIntensity(0.4)
self.lightEntities[(trans_x, trans_y)].addComponent(self.lights[(trans_x, trans_y)])
self.lightTransforms[(trans_x, trans_y)] = Qt3DCore.QTransform(self.lightEntities[(trans_x, trans_y)])
self.lightTransforms[(trans_x, trans_y)].setTranslation(QtGui.QVector3D(trans_x, trans_y, 100.0))
self.lightEntities[(trans_x, trans_y)].addComponent(self.lightTransforms[(trans_x, trans_y)])
# Get co-registered head, fiducials and electrodes
data_path = Path(mne.datasets.sample.data_path())
fs_subjects_dir = data_path / 'subjects'
trans_fname = data_path / 'MEG' / 'sample' / 'sample_audvis_raw-trans.fif'
trans = mne.read_trans(trans_fname)
montage = mne.channels.make_standard_montage('GSN-HydroCel-129')
info = mne.create_info(montage.ch_names, 100, ch_types='eeg')
raw = mne.io.RawArray(np.zeros((len(montage.ch_names), 100)), info)
raw.set_montage(montage)
eeg, fid, surf = get_aligned_artifacts(raw.info, subject=self.fs_subject, trans=trans,
subjects_dir=fs_subjects_dir, coord_frame='mri')
self.head_surf = surf
path_out = Path(str(Path(__file__).parent.absolute() / f"{self.fs_subject}_head.obj"))
if True: #not path_out.exists():
mesh = trimesh.Trimesh(surf["rr"] * 1000, surf["tris"])
open3d_mesh = open3d.geometry.TriangleMesh(vertices=open3d.utility.Vector3dVector(mesh.vertices),
triangles=open3d.utility.Vector3iVector(mesh.faces))
mesh = open3d_mesh.simplify_quadric_decimation(int(20000))
mesh = trimesh.Trimesh(np.asarray(mesh.vertices), np.asarray(mesh.triangles))
with path_out.open('w') as file_obj:
file_obj.write(trimesh.exchange.obj.export_obj(mesh))
# Head
self.data = QtCore.QUrl.fromLocalFile(str(path_out))
self.head_entity = Qt3DCore.QEntity(self.root_entity)
self.head_mesh = Qt3DRender.QMesh()
self.head_mesh.setMeshName(str(path_out))
self.head_mesh.setSource(self.data)
self.head_entity.addComponent(self.head_mesh)
self.head_entity.addComponent(self.material)
self.camController = Qt3DExtras.QOrbitCameraController(self.head_mesh)
self.camController.setCamera(self.camera)
self.camController.setLinearSpeed(self.camController.linearSpeed()*100)
self.mesh_center_of_mass = np.median(surf['rr'], 0)*1000
self.camera.setViewCenter(QtGui.QVector3D(*(self.mesh_center_of_mass)))
self.camera.viewCenterChanged.connect(self.cam_view_center_changed)
## EEG electrodes and Fiducials
self.electrode_material = Qt3DExtras.QPhongMaterial(diffuse=QtGui.QColor("#665423"))
self.fid_material = Qt3DExtras.QPhongMaterial(diffuse=QtGui.QColor("#0000FF"))
self.selected_material = Qt3DExtras.QPhongMaterial(diffuse=QtGui.QColor("#FF0000"))
self.edited_material = Qt3DExtras.QPhongMaterial(diffuse=QtGui.QColor("#FFFF00"))
self.acq_material = Qt3DExtras.QPhongMaterial(diffuse=QtGui.QColor("#00FF00"))
self.selected_item = None
self.coordinate_meshes = {}
self.coordinate_entities = {}
self.coordinate_transforms = {}
self.coordinate_materials = {}
for kind, var in zip(["fid", "elec"], [fid, eeg]):
for label, pos in var.iterrows():
pos = pos.values*1000
self.coordinate_meshes[label] = Qt3DExtras.QSphereMesh(rings=20, slices=20, radius=3)
self.coordinate_entities[label] = Qt3DCore.QEntity(self.root_entity)
self.coordinate_transforms[label] = Qt3DCore.QTransform(self.coordinate_meshes[label])
self.coordinate_transforms[label].setTranslation(QtGui.QVector3D(*pos))
self.coordinate_entities[label].addComponent(self.coordinate_meshes[label])
self.coordinate_entities[label].addComponent(self.coordinate_transforms[label])
self.acq_coordinate_meshes = {}
self.acq_coordinate_entities = {}
self.acq_coordinate_transforms = {}
self.df_montage = pd.concat([fid, eeg])
self.df_montage.columns = ["x", "y", "z"]
self.df_acq = pd.concat([self.df_montage.copy().rename(columns={"x": f"x{i+1}", "y": f"y{i+1}", "z": f"z{i+1}"})
for i in range(4)], axis=1)
model = DataFrameModel(self.df_acq)
self.tableView.setModel(model)
self.df_acq.loc[:, :] = np.nan
self.set_table_view_selection(0)
self.view.setRootEntity(self.root_entity)
self.subject_name_wgt.currentTextChanged.connect(self.load_subject)
self.update_subject_lst()
def __init__(self, parent=None):
super().__init__(parent)
self.rnd_lat = random.randrange(5200,5300) / 100.0
self.rnd_hdg = random.randrange(-300,300) / 100.0
self.rnd_dec = random.randrange(-50,50) / 10.0
print(self.rnd_lat, self.rnd_hdg, self.rnd_dec)
self.view = Qt3DExtras.Qt3DWindow()
self.view.defaultFrameGraph().setClearColor(QtGui.QColor("#4d4d4f"))
self.container = QtWidgets.QWidget.createWindowContainer(self.view)
self.vLayout = QtWidgets.QVBoxLayout(self)
self.vLayout.addWidget(self.container, 1)
self.input_aspect = Qt3DInput.QInputAspect()
self.view.registerAspect(self.input_aspect)
self.rootEntity = Qt3DCore.QEntity()
self.view.setRootEntity(self.rootEntity)
###
cameraEntity = self.view.camera()
cameraEntity.lens().setPerspectiveProjection(5.0, 16.0 / 9.0, 10, 100000.0)
cameraEntity.setPosition(QtGui.QVector3D(0, 1000, 50000))
cameraEntity.setUpVector(QtGui.QVector3D(0, 1, 0))
cameraEntity.setViewCenter(QtGui.QVector3D(0, 1000, 0))
self.camController = Qt3DExtras.QOrbitCameraController(self.rootEntity)
self.camController.setCamera(cameraEntity)
###
self.lightEntity = Qt3DCore.QEntity(self.rootEntity)
self.light = Qt3DRender.QPointLight(self.lightEntity)
self.light.setColor("white")
self.light.setIntensity(1)
self.lightTransform = Qt3DCore.QTransform(self.lightEntity)
self.lightTransform.setTranslation(cameraEntity.position())
self.lightEntity.addComponent(self.light)
self.lightEntity.addComponent(self.lightTransform)
### sky
# self.skyMesh = Qt3DExtras.QSphereMesh(radius=5000, rings=94, slices=48)
# self.skyMaterial = Qt3DExtras.QPhongMaterial(diffuse=QtGui.QColor("#ff0000"))
# self.skyEntity = Qt3DCore.QEntity(self.rootEntity)
# self.skyEntity.addComponent(self.skyMesh)
# self.skyEntity.addComponent(self.skyMaterial)
### hdg, x right, y up
# Cylinder cog = (0,0,0) long direction = y
self.hdgMesh = Qt3DExtras.QCylinderMesh(length=1200.0, radius=100.0, rings=100, slices=20)
rotation = QtGui.QQuaternion.fromAxisAndAngle(QtGui.QVector3D(0.0, 0.0, 1.0), 15.0)
translation = QtGui.QVector3D(0.0, 600.0, 0.0)
self.hdgTransform = Qt3DCore.QTransform(translation=translation, rotation=rotation)
self.hdgMaterial = Qt3DExtras.QPhongMaterial(diffuse=QtGui.QColor("#ff0000"))
self.hdgEntity = Qt3DCore.QEntity(self.rootEntity)
self.hdgEntity.addComponent(self.hdgMesh)
self.hdgEntity.addComponent(self.hdgMaterial)
self.hdgEntity.addComponent(self.hdgTransform)
### lat x up, y left
self.latMesh = Qt3DExtras.QCylinderMesh(length=200.0, radius=100.0, rings=100, slices=20)
rotation = QtGui.QQuaternion.fromAxisAndAngle(QtGui.QVector3D(0.0, 0.0, 1.0), 90.0)
translation = QtGui.QVector3D(0.0, 700.0, 0.0)
self.latTransform = Qt3DCore.QTransform(rotation=rotation, translation=translation)
self.latMaterial = Qt3DExtras.QPhongMaterial(diffuse=QtGui.QColor("#00ff00"))
self.latEntity = Qt3DCore.QEntity(self.hdgEntity)
self.latEntity.addComponent(self.latMesh)
self.latEntity.addComponent(self.latMaterial)
self.latEntity.addComponent(self.latTransform)
### ra x up, y left
self.raMesh = Qt3DExtras.QCylinderMesh(length=500.0, radius=100.0, rings=100, slices=20)
rotation1 = QtGui.QQuaternion.fromAxisAndAngle(QtGui.QVector3D(0.0, 0.0, -1.0), 90)
rotation2 = QtGui.QQuaternion.fromAxisAndAngle(QtGui.QVector3D(-1.0, 0.0, 0.0), 90)
rotation = rotation1 * rotation2
translation = QtGui.QVector3D(200.0, 0.0, 0.0)
self.raTransform = Qt3DCore.QTransform(rotation=rotation, translation=translation)
self.raMaterial = Qt3DExtras.QPhongMaterial(diffuse=QtGui.QColor("#beb32b"))
self.raEntity = Qt3DCore.QEntity(self.latEntity)
self.raEntity.addComponent(self.raMesh)
self.raEntity.addComponent(self.raMaterial)
self.raEntity.addComponent(self.raTransform)
### dec
self.decMesh = Qt3DExtras.QCylinderMesh(length=500.0, radius=100.0, rings=100, slices=20)
rotation = QtGui.QQuaternion.fromAxisAndAngle(QtGui.QVector3D(1.0, 0.0, 0.0), 90.0)
translation = QtGui.QVector3D(0.0, 350.0, 0.0)
self.decTransform = Qt3DCore.QTransform(rotation=rotation, translation=translation)
self.decMaterial = Qt3DExtras.QPhongMaterial(diffuse=QtGui.QColor("#0000ff"))
self.decEntity = Qt3DCore.QEntity(self.raEntity)
self.decEntity.addComponent(self.decMesh)
self.decEntity.addComponent(self.decMaterial)
self.decEntity.addComponent(self.decTransform)
### tube
self.tubeMesh = Qt3DExtras.QCylinderMesh(length=1200.0, radius=100.0, rings=100, slices=20)
rotation = QtGui.QQuaternion.fromAxisAndAngle(QtGui.QVector3D(-1.0, 0.0, 0.0), 90.0)
translation = QtGui.QVector3D(0.0, 350.0, 100.0)
self.tubeTransform = Qt3DCore.QTransform(rotation=rotation, translation=translation)
self.tubeMaterial = Qt3DExtras.QPhongMaterial(diffuse=QtGui.QColor("#ffffff"))
self.tubeEntity = Qt3DCore.QEntity(self.decEntity)
self.tubeEntity.addComponent(self.tubeMesh)
self.tubeEntity.addComponent(self.tubeMaterial)
self.tubeEntity.addComponent(self.tubeTransform)
self.ocuMesh = Qt3DExtras.QCylinderMesh(length=100.0, radius=50.0, rings=100, slices=20)
translation = QtGui.QVector3D(0.0, -650.0, 0.0)
self.ocuTransform = Qt3DCore.QTransform(translation=translation)
self.ocuMaterial = Qt3DExtras.QPhongMaterial(diffuse=QtGui.QColor("#ffffff"))
self.ocuEntity = Qt3DCore.QEntity(self.tubeEntity)
self.ocuEntity.addComponent(self.ocuMesh)
self.ocuEntity.addComponent(self.ocuMaterial)
self.ocuEntity.addComponent(self.ocuTransform)
self.fakeMesh = Qt3DExtras.QCuboidMesh(xExtent=500, yExtent=500, zExtent=500)
translation = QtGui.QVector3D(-1000.0, 0, 0.0)
self.fakeTransform = Qt3DCore.QTransform(translation=translation)
self.fakeMaterial = Qt3DExtras.QPhongMaterial(diffuse=QtGui.QColor("#ffffff"))
self.fakeEntity = Qt3DCore.QEntity(self.rootEntity)
self.fakeEntity.addComponent(self.fakeMesh)
self.fakeEntity.addComponent(self.fakeMaterial)
self.fakeEntity.addComponent(self.fakeTransform)
self._heading = 0
self._latitude = 45
self._ra = 0
self._dec = 90
def __init__(self) -> None:
self.view = Qt3DExtras.Qt3DWindow()
self._configure_view()
self.widget = QWidget.createWindowContainer(self.view)
self.sphere_mgr = SphereVC(self.view)
self.albedo_mapper = AlbedoTextureMapper()