コード例 #1
0
ファイル: terminal.py プロジェクト: isaacfink21/anvio
    def info_single(self,
                    message,
                    overwrite_verbose=False,
                    mc='yellow',
                    nl_before=0,
                    nl_after=0,
                    cut_after=80,
                    level=1,
                    progress=None):
        if isinstance(message, str):
            message = remove_spaces(message)

        if level not in self.single_line_prefixes:
            raise TerminalError(
                "the `info_single` function does not know how to deal with a level of %d :/"
                % level)

        if cut_after:
            message_line = c(
                "%s%s\n" % (self.single_line_prefixes[level],
                            textwrap.fill(str(message), cut_after)), mc)
        else:
            message_line = c(
                "%s%s\n" % (self.single_line_prefixes[level], str(message)),
                mc)

        message_line = ('\n' * nl_before) + message_line + ('\n' * nl_after)

        if progress:
            progress.clear()
            self.write(message_line, overwrite_verbose=False)
            progress.update(progress.msg)
        else:
            self.write(message_line, overwrite_verbose=False)
コード例 #2
0
    def info(self,
             key,
             value,
             quiet=False,
             display_only=False,
             nl_before=0,
             nl_after=0,
             lc='cyan',
             mc='yellow'):
        if not display_only:
            self.info_dict[key] = value

        if quiet:
            return True

        if type(value) == str:
            value = remove_spaces(value)
        if type(value) == int:
            value = pretty_print(value)

        label = constants.get_pretty_name(key)

        info_line = "%s%s %s: %s\n%s" % ('\n' * nl_before, c(label, lc), '.' *
                                         (self.width - len(label)),
                                         c(str(value), mc), '\n' * nl_after)

        if self.info_file_obj:
            self.info_file_obj.write(info_line)

        if self.verbose:
            sys.stderr.write(info_line)
コード例 #3
0
    def info(self,
             key,
             value,
             quiet=False,
             display_only=False,
             overwrite_verbose=False,
             nl_before=0,
             nl_after=0,
             lc='cyan',
             mc='yellow',
             progress=None):
        if not display_only:
            self.info_dict[key] = value

        if isinstance(value, bool):
            pass
        elif isinstance(value, str):
            value = remove_spaces(value)
        elif isinstance(value, int):
            value = pretty_print(value)

        label = constants.get_pretty_name(key)

        info_line = "%s%s %s: %s\n%s" % ('\n' * nl_before, c(label, lc), '.' *
                                         (self.width - len(label)),
                                         c(str(value), mc), '\n' * nl_after)

        if progress:
            progress.clear()
            self.write(info_line, overwrite_verbose=False, quiet=quiet)
            progress.update(progress.msg)
        else:
            self.write(info_line,
                       quiet=quiet,
                       overwrite_verbose=overwrite_verbose)
コード例 #4
0
    def info_single(self, message, mc='yellow', nl_before=0, nl_after=0, cut_after=80):
        if isinstance(message, str):
            message = remove_spaces(message)

        if cut_after:
            message_line = c("* %s\n" % (textwrap.fill(str(message), cut_after)), mc)
        else:
            message_line = c("* %s\n" % str(message), mc)

        message_line = ('\n' * nl_before) + message_line + ('\n' * nl_after)

        self.write(message_line)
コード例 #5
0
ファイル: terminal.py プロジェクト: giriarteS/anvio
    def warning(self, message, header='WARNING', lc = 'red', raw = False):
        if type(message) == str:
            message = remove_spaces(message)

        message_line = ''
        header_line = c("\n%s\n%s\n" % (header, '=' * (self.width + 2)), lc)
        if raw:
            message_line = c("%s\n\n" % (message), lc)
        else:
            message_line = c("%s\n\n" % (textwrap.fill(str(message), 80)), lc)

        self.write(header_line + message_line)
コード例 #6
0
ファイル: terminal.py プロジェクト: giriarteS/anvio
    def info_single(self, message, mc = 'yellow', nl_before = 0, nl_after = 0, cut_after = 80):
        if type(message) == str:
            message = remove_spaces(message)

        if cut_after:
            message_line = c("* %s\n" % (textwrap.fill(str(message), cut_after)), mc)
        else:
            message_line = c("* %s\n" % str(message), mc)

        message_line = ('\n' * nl_before) + message_line + ('\n' * nl_before)

        self.write(message_line)
コード例 #7
0
    def warning(self, message, header='WARNING', lc='red', raw=False, overwrite_verbose=False):
        if isinstance(message, str):
            message = remove_spaces(message)

        message_line = ''
        header_line = c("\n%s\n%s\n" % (header, '=' * (self.width + 2)), lc)
        if raw:
            message_line = c("%s\n\n" % (message), lc)
        else:
            message_line = c("%s\n\n" % (textwrap.fill(str(message), 80)), lc)

        self.write((header_line + message_line) if message else header_line, overwrite_verbose=overwrite_verbose)
コード例 #8
0
ファイル: terminal.py プロジェクト: gitter-badger/anvio
    def info_single(self, message, mc = 'yellow', nl_before = 0, nl_after = 0, cut_after = 80):
        if type(message) == str:
            message = remove_spaces(message)

        if cut_after:
            message_line = c("* %s\n" % (textwrap.fill(str(message), cut_after)), mc)
        else:
            message_line = c("* %s\n" % str(message), mc)

        if self.verbose:
            sys.stderr.write('\n' * nl_before)
            sys.stderr.write(message_line)
            sys.stderr.write('\n' * nl_after)
コード例 #9
0
ファイル: terminal.py プロジェクト: paczian/anvio
    def info_single(self, message, mc="yellow", nl_before=0, nl_after=0, cut_after=80):
        if type(message) == str:
            message = remove_spaces(message)

        if cut_after:
            message_line = c("* %s\n" % (textwrap.fill(str(message), cut_after)), mc)
        else:
            message_line = c("* %s\n" % str(message), mc)

        if self.verbose:
            sys.stderr.write("\n" * nl_before)
            sys.stderr.write(message_line)
            sys.stderr.write("\n" * nl_after)
コード例 #10
0
ファイル: terminal.py プロジェクト: meren/anvio
    def warning(self, message, header='WARNING', lc='red', raw=False, overwrite_verbose=False, nl_before=0, nl_after=0):
        if isinstance(message, str):
            message = remove_spaces(message)

        message_line = ''
        header_line = c("%s\n%s\n%s\n" % (('\n' * nl_before), header,
                                          '=' * (self.width + 2)), lc)
        if raw:
            message_line = c("%s\n\n%s" % ((message), '\n' * nl_after), lc)
        else:
            message_line = c("%s\n\n%s" % (textwrap.fill(str(message), 80), '\n' * nl_after), lc)

        self.write((header_line + message_line) if message else header_line, overwrite_verbose=overwrite_verbose)
コード例 #11
0
ファイル: terminal.py プロジェクト: paczian/anvio
    def warning(self, message, header="WARNING", lc="red", raw=False):
        if type(message) == str:
            message = remove_spaces(message)

        header_line = c("\n%s\n%s\n" % (header, "=" * (self.width + 2)), lc)
        if raw:
            message_line = c("%s\n\n" % (message), lc)
        else:
            message_line = c("%s\n\n" % (textwrap.fill(str(message), 80)), lc)

        if self.verbose:
            sys.stderr.write(header_line)
            if message:
                sys.stderr.write(message_line)
コード例 #12
0
    def warning(self, message, header='WARNING', lc='red', raw=False):
        if type(message) == str:
            message = remove_spaces(message)

        header_line = c("\n%s\n%s\n" % (header, '=' * (self.width + 2)), lc)
        if raw:
            message_line = c("%s\n\n" % (message), lc)
        else:
            message_line = c("%s\n\n" % (textwrap.fill(str(message), 80)), lc)

        if self.verbose:
            sys.stderr.write(header_line)
            if message:
                sys.stderr.write(message_line)
コード例 #13
0
ファイル: terminal.py プロジェクト: giriarteS/anvio
    def info(self, key, value, quiet = False, display_only = False, nl_before = 0, nl_after = 0, lc = 'cyan', mc = 'yellow'):
        if not display_only:
            self.info_dict[key] = value

        if type(value) == str:
            value = remove_spaces(value)
        if type(value) == int:
            value = pretty_print(value)

        label = constants.get_pretty_name(key)

        info_line = "%s%s %s: %s\n%s" % ('\n' * nl_before, c(label, lc),
                                         '.' * (self.width - len(label)),
                                         c(str(value), mc), '\n' * nl_after)

        self.write(info_line, quiet = quiet)
コード例 #14
0
    def warning(self, message, header='WARNING', lc='red', raw=False, overwrite_verbose=False, nl_before=0, nl_after=0, progress=None):
        if isinstance(message, str):
            message = remove_spaces(message)

        message_line = ''
        header_line = c("%s\n%s\n%s\n" % (('\n' * nl_before), header,
                                          '=' * (self.width + 2)), lc)
        if raw:
            message_line = c("%s\n\n%s" % ((message), '\n' * nl_after), lc)
        else:
            message_line = c("%s\n\n%s" % (textwrap.fill(str(message), 80), '\n' * nl_after), lc)

        if progress:
            progress.clear()
            self.write((header_line + message_line) if message else header_line, overwrite_verbose=overwrite_verbose)
            if progress.msg and progress.pid:
                progress.update(progress.msg)
        else:
            self.write((header_line + message_line) if message else header_line, overwrite_verbose=overwrite_verbose)
コード例 #15
0
ファイル: terminal.py プロジェクト: paczian/anvio
    def info(self, key, value, quiet=False, display_only=False, lc="cyan", mc="yellow"):
        if not display_only:
            self.info_dict[key] = value

        if quiet:
            return True

        if type(value) == str:
            value = remove_spaces(value)
        if type(value) == int:
            value = pretty_print(value)

        label = constants.get_pretty_name(key)

        info_line = "%s %s: %s\n" % (c(label, lc), "." * (self.width - len(label)), c(str(value), mc))

        if self.info_file_obj:
            self.info_file_obj.write(info_line)

        if self.verbose:
            sys.stderr.write(info_line)
コード例 #16
0
ファイル: terminal.py プロジェクト: meren/anvio
    def info_single(self, message, mc='yellow', nl_before=0, nl_after=0, cut_after=80, level=1, progress=None):
        if isinstance(message, str):
            message = remove_spaces(message)

        if level not in self.single_line_prefixes:
            raise TerminalError("the `info_single` function does not know how to deal with a level of %d :/" % level)

        if cut_after:
            message_line = c("%s%s\n" % (self.single_line_prefixes[level], textwrap.fill(str(message), cut_after)), mc)
        else:
            message_line = c("%s%s\n" % (self.single_line_prefixes[level], str(message)), mc)

        message_line = ('\n' * nl_before) + message_line + ('\n' * nl_after)

        if progress:
            progress.clear()
            self.write(message_line)
            progress.update(progress.msg)

        else:
            self.write(message_line)
コード例 #17
0
ファイル: terminal.py プロジェクト: meren/anvio
    def info(self, key, value, quiet=False, display_only=False, nl_before=0, nl_after=0, lc='cyan', mc='yellow', progress=None):
        if not display_only:
            self.info_dict[key] = value

        if isinstance(value, bool):
            pass
        elif isinstance(value, str):
            value = remove_spaces(value)
        elif isinstance(value, int):
            value = pretty_print(value)

        label = constants.get_pretty_name(key)

        info_line = "%s%s %s: %s\n%s" % ('\n' * nl_before, c(label, lc),
                                         '.' * (self.width - len(label)),
                                         c(str(value), mc), '\n' * nl_after)

        if progress:
            progress.clear()
            self.write(info_line, quiet=quiet)
            progress.update(progress.msg)

        else:
            self.write(info_line, quiet=quiet)
コード例 #18
0
ファイル: terminal.py プロジェクト: isaacfink21/anvio
    def info(self,
             key,
             value,
             quiet=False,
             display_only=False,
             overwrite_verbose=False,
             nl_before=0,
             nl_after=0,
             lc='cyan',
             mc='yellow',
             progress=None,
             align_long_values=True):
        """
        This function prints information nicely to the terminal in the form:
        key ........: value

        PARAMETERS
        ==========
        key : str
            what to print before the dots
        value : str
            what to print after the dots
        quiet : boolean
            the standard anvi'o quiet parameter which, if True, suppresses some output
        display_only : boolean
            if False, the key value pair is also stored in the info dictionary
        overwrite_verbose : boolean
            if True, downstream quiet parameters (though not the global --quiet) are ignored to produce more verbose output
        nl_before : int
            number of lines to print before the key-value line
        nl_after : int
            number of lines to print after the key-value line
        lc : color str
            the color of the label (key)
        mc : color str
            the color of the value
        progress : Progress instance
            provides the Progress bar to use
        align_long_values : boolean
            if True, values that are longer than the terminal width will be broken up into different lines that
            align nicely
        """
        if not display_only:
            self.info_dict[key] = value

        if value is None:
            value = "None"
        elif isinstance(value, bool) or isinstance(value, float) or isinstance(
                value, list):
            value = "%s" % value
        elif isinstance(value, str):
            value = remove_spaces(value)
        elif isinstance(value, int):
            value = pretty_print(value)

        label = constants.get_pretty_name(key)

        info_line = "%s%s %s: %s\n%s" % ('\n' * nl_before, c(label, lc), '.' *
                                         (self.width - len(label)),
                                         c(str(value), mc), '\n' * nl_after)
        if align_long_values:
            terminal_width = get_terminal_size()[0]
            wrap_width = terminal_width - self.width - 3
            wrapped_value_lines = textwrap.wrap(value,
                                                width=wrap_width,
                                                break_long_words=False,
                                                break_on_hyphens=False)
            if len(wrapped_value_lines) == 0:
                aligned_value_str = value
            else:
                aligned_value_str = wrapped_value_lines[0]
                for line in wrapped_value_lines[1:]:
                    aligned_value_str += "\n %s  %s" % (' ' * self.width, line)

            info_line = "%s%s %s: %s\n%s" % (
                '\n' * nl_before, c(label, lc), '.' *
                (self.width - len(label)), c(str(aligned_value_str),
                                             mc), '\n' * nl_after)

        if progress:
            progress.clear()
            self.write(info_line, overwrite_verbose=False, quiet=quiet)
            progress.update(progress.msg)
        else:
            self.write(info_line,
                       quiet=quiet,
                       overwrite_verbose=overwrite_verbose)