def load_cfg(self): Configure.load_cfg(self) ucsc_db = self.cfg_vals[cbv_const.LATEST_UCSC_FILE_NAME] ljb_db = self.cfg_vals[cbv_const.LATEST_LJB_FILE_PREFIX] + '.txt.gz' self.__ucsc_reader = UcscReader() self.__ucsc_reader.read(ucsc_db) self.__ljb_reader = LjbReader() self.__ljb_reader.read(ljb_db)
def __init__(self): LjbUpdater.__init__(self) Configure.__init__(self) self.chromosome_list = ['1', '2', '3', '4', '5', '6', '7', '8', '9', '10', '11', '12', '13', '14', '15', '16', '17', '18', '19', '20', '21', '22', 'X', 'Y']
def __init__(self): UcscUpdater.__init__(self) Configure.__init__(self)
def __init__(self): Configure.__init__(self)