コード例 #1
0
def search_haystack(request, species_wid, query):
    #search
    if species_wid is None:
        species_wid = Species.objects.all()[0].wid
    results = SearchQuerySet().filter(species_wid=species_wid).filter(
        content=query)

    #calculate facets
    facets = results.facet('model_type')
    tmp = facets.facet_counts()['fields']['model_type']
    modelNameFacet = []
    objectTypes = getObjectTypes()
    models = []
    for tmp2 in tmp:
        modelName = objectTypes[objectTypes.index(tmp2[0])]
        modelNameFacet.append({
            'name': modelName,
            'verbose_name': getModel(modelName)._meta.verbose_name,
            'count': tmp2[1],
        })
        models.append(getModel(modelName))
    modelNameFacet.sort(lambda x, y: cmp(x['verbose_name'], y['verbose_name']))

    #narrow search by facets
    model_type = request.GET.get('model_type', '')
    if model_type:
        results = results.models(getModel(model_type))

    #order results
    results = results.order_by('wid')

    #convert results to query set
    queryset = EmptyQuerySet()
    for object in results:
        tmp = object.model.objects.none()
        tmp._result_cache.append(object.object)
        queryset = chain(queryset, tmp)

    #form response
    return render_queryset_to_response(species_wid=species_wid,
                                       request=request,
                                       models=models,
                                       queryset=queryset,
                                       templateFile='public/search.html',
                                       data={
                                           'query': query,
                                           'engine': 'haystack',
                                           'model_type': model_type,
                                           'modelNameFacet': modelNameFacet,
                                       })
コード例 #2
0
ファイル: views.py プロジェクト: CyanoFactory/CyanoFactoryKB
def search_haystack(request, species_wid, query):
	#search
	if species_wid is None:
		species_wid = Species.objects.all()[0].wid
	results = SearchQuerySet().filter(species_wid=species_wid).filter(content=query)
	
	#calculate facets		
	facets = results.facet('model_type')
	tmp = facets.facet_counts()['fields']['model_type']
	modelNameFacet = []
	objectTypes = getObjectTypes()
	models = []
	for tmp2 in tmp:
		modelName = objectTypes[objectTypes.index(tmp2[0])]
		modelNameFacet.append({
			'name':modelName, 
			'verbose_name': getModel(modelName)._meta.verbose_name,
			'count':tmp2[1],
			})
		models.append(getModel(modelName))
	modelNameFacet.sort(lambda x, y:cmp(x['verbose_name'], y['verbose_name']))
	
	#narrow search by facets
	model_type = request.GET.get('model_type', '')
	if model_type:
		results = results.models(getModel(model_type))
		
	#order results
	results = results.order_by('wid')
	
	#convert results to query set
	queryset = EmptyQuerySet()
	for object in results:
		tmp = object.model.objects.none()
		tmp._result_cache.append(object.object)
		queryset = chain(queryset, tmp)
	
	#form response
	return render_queryset_to_response(
		species_wid = species_wid,
		request = request, 
		models = models, 
		queryset = queryset, 
		templateFile = 'public/search.html', 
		data = {
			'query': query,
			'engine': 'haystack',
			'model_type': model_type,
			'modelNameFacet': modelNameFacet,
			})
コード例 #3
0
ファイル: forms.py プロジェクト: CyanoFactory/CyanoFactoryKB
	def __init__(self, *args, **kwargs):
		super(ExportDataForm, self).__init__(*args, **kwargs)
		
		choices = []
		for species in Species.objects.values('wid', 'name').all():
			choices.append((species['wid'], species['name'], ))
		self.fields['species'].choices = choices
		
		model_types = getObjectTypes()
		models = getModels()
		choices = []
		for model_type in model_types:
			choices.append((model_type, models[model_type]._meta.verbose_name_plural, ))
		self.fields['model_type'].choices = choices
		self.fields['model_type'].initial = model_types
コード例 #4
0
def exportData(request, species_wid=None):
    getDict = request.GET.copy()
    if getDict.get('format', ''):
        getDict.__setitem__('species', getDict.get('species', species_wid))
    form = ExportDataForm(getDict or None)
    if not form.is_valid():
        return render_queryset_to_response(
            species_wid=species_wid,
            request=request,
            templateFile='public/exportDataForm.html',
            data={'form': form})
    else:
        species = Species.objects.get(wid=form.cleaned_data['species'])
        queryset = EmptyQuerySet()
        models = []

        if form.cleaned_data['all_model_types'] == 'True':
            model_types = getObjectTypes()
        else:
            model_types = form.cleaned_data['model_type']

        for model_type in model_types:
            model = getModel(model_type)
            if issubclass(model, SpeciesComponent):
                queryset = chain(
                    queryset,
                    model.objects.filter(
                        species__id=species.id).select_related(depth=2).all())
            else:
                queryset = chain(
                    queryset,
                    model.objects.select_related(depth=2).filter(
                        id=species.id))
            models.append(getModel(model_type))

        return render_queryset_to_response(
            species_wid=species_wid,
            request=request,
            queryset=queryset,
            templateFile='public/exportDataResult.html',
            models=models)
コード例 #5
0
    def __init__(self, *args, **kwargs):
        super(ExportDataForm, self).__init__(*args, **kwargs)

        choices = []
        for species in Species.objects.values('wid', 'name').all():
            choices.append((
                species['wid'],
                species['name'],
            ))
        self.fields['species'].choices = choices

        model_types = getObjectTypes()
        models = getModels()
        choices = []
        for model_type in model_types:
            choices.append((
                model_type,
                models[model_type]._meta.verbose_name_plural,
            ))
        self.fields['model_type'].choices = choices
        self.fields['model_type'].initial = model_types
コード例 #6
0
ファイル: views.py プロジェクト: CyanoFactory/CyanoFactoryKB
def exportData(request, species_wid=None):
	getDict = request.GET.copy()
	if getDict.get('format', ''):
		getDict.__setitem__('species', getDict.get('species', species_wid))	
	form = ExportDataForm(getDict or None)
	if not form.is_valid():		
		return render_queryset_to_response(
			species_wid=species_wid,
			request = request,
			templateFile = 'public/exportDataForm.html', 
			data = {
				'form': form
				}
			)
	else:		
		species = Species.objects.get(wid = form.cleaned_data['species'])
		queryset = EmptyQuerySet()
		models = []
		
		if form.cleaned_data['all_model_types'] == 'True':
			model_types = getObjectTypes()
		else:
			model_types = form.cleaned_data['model_type']
		
		for model_type in model_types:
			model = getModel(model_type)
			if issubclass(model, SpeciesComponent):
				queryset = chain(queryset, model.objects.filter(species__id=species.id).select_related(depth=2).all())
			else:
				queryset = chain(queryset, model.objects.select_related(depth=2).filter(id=species.id))
			models.append(getModel(model_type))
		
		return render_queryset_to_response(
			species_wid = species_wid,
			request = request, 
			queryset = queryset, 
			templateFile = 'public/exportDataResult.html', 
			models = models)
コード例 #7
0
ファイル: views.py プロジェクト: CovertLab/WholeCellKB
def exportDataTemplate(request):
	queryset = EmptyQuerySet()
	models = []
	
	for model_type in getObjectTypes():
		models.append(getModel(model_type))
		
	#write work book
	wb = writeExcel(
		Species(wid = '__NEW__', name = 'New species'),
		queryset, models, request.user.is_anonymous())

	#save to string
	result = StringIO()
	wb.save(filename = result)

	#generate HttpResponse
	response = HttpResponse(
		result.getvalue(),
		mimetype = "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet",
		content_type = "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet")
	response['Content-Disposition'] = "attachment; filename=data.xlsx"
	return response
コード例 #8
0
ファイル: views.py プロジェクト: CyanoFactory/CyanoFactoryKB
def list(request, species_wid, model_type):
	try:
		getObjectTypes().index(model_type)
	except ValueError:
		raise Http404
		
	species = Species.objects.get(wid=species_wid)
	model = getModel(model_type)
	objects = model.objects.all().filter(species__id=species.id)
	
	facet_fields = []	
	for field_full_name in model._meta.facet_fields:
		#facet
		field_names = str(field_full_name).split('__')
		tmp_model = model
		field_verbose_name = []
		for field_name in field_names:
			field = tmp_model._meta.get_field_by_name(field_name)[0]
			field_verbose_name.append(field.verbose_name)
			if isinstance(field, (ForeignKey, ManyToManyField)):
				tmp_model = field.rel.to
		field_verbose_name = ' › '.join(field_verbose_name)
				
		if isinstance(field, (ForeignKey, ManyToManyField)) and not issubclass(field.rel.to, Entry):
			continue
		
		if isinstance(field, (ForeignKey, ManyToManyField)):
			tmp = model.objects.filter(species__id=species.id).order_by(field_full_name + '__name').values(field_full_name).annotate(count=Count(field_full_name))
		else:
			tmp = model.objects.filter(species__id=species.id).order_by(field_full_name).values(field_full_name).annotate(count=Count(field_full_name))
		facets = []
		for facet in tmp:
			value = facet[field_full_name]			
			if value is None or unicode(value) == '':
				continue
			
			if isinstance(field, (ForeignKey, ManyToManyField)):
				tmp2 = tmp_model.objects.values('wid', 'name').get(id=value)
				id = tmp2['wid']
				name = capfirst(tmp2['name'])
			elif (field.choices is not None) and (len(field.choices) > 0) and (not isinstance(field, (BooleanField, NullBooleanField))):	
				id = value
				choices = [x[0] for x in field.choices]
				if id in choices:
					name = field.choices[choices.index(id)][1]
				else:
					name = capfirst(value)
			else:
				id = value
				name = capfirst(value)
			if value is not None and unicode(value) != '':
				facets.append({
					'id': unicode(id), 
					'name': unicode(name),
					'count': facet['count']})
		if len(facets) > 1:
			facet_fields.append({ 
				'name': field_full_name,
				'verbose_name': field_verbose_name, 
				'facets': facets,
				})
	
		#filter
		val = request.GET.get(field_full_name)		
		if val:
			if isinstance(field, (ForeignKey, ManyToManyField)):
				kwargs = {field_full_name + '__wid': val}
			elif isinstance(field, (BooleanField, NullBooleanField)):
				kwargs = {field_full_name: val == 'True'}
			elif isinstance(field, (AutoField, BigIntegerField, DecimalField, FloatField, IntegerField, PositiveIntegerField, PositiveSmallIntegerField, SmallIntegerField)):
				kwargs = {field_full_name: float(val)}
			else:
				kwargs = {field_full_name: val}
			objects = objects.filter(**kwargs)

	return render_queryset_to_response(
		species_wid = species_wid,
		request = request, 
		models = [model], 
		queryset = objects, 
		templateFile = 'public/list.html', 
		data = {
			'model_type': model_type,
			'model_verbose_name': model._meta.verbose_name,
			'model_verbose_name_plural': model._meta.verbose_name_plural,
			'facet_fields': facet_fields,
			})
コード例 #9
0
def list(request, species_wid, model_type):
    try:
        getObjectTypes().index(model_type)
    except ValueError:
        raise Http404

    species = Species.objects.get(wid=species_wid)
    model = getModel(model_type)
    objects = model.objects.all().filter(species__id=species.id)

    facet_fields = []
    for field_full_name in model._meta.facet_fields:
        #facet
        field_names = str(field_full_name).split('__')
        tmp_model = model
        field_verbose_name = []
        for field_name in field_names:
            field = tmp_model._meta.get_field_by_name(field_name)[0]
            field_verbose_name.append(field.verbose_name)
            if isinstance(field, (ForeignKey, ManyToManyField)):
                tmp_model = field.rel.to
        field_verbose_name = ' › '.join(field_verbose_name)

        if isinstance(field, (ForeignKey, ManyToManyField)) and not issubclass(
                field.rel.to, Entry):
            continue

        if isinstance(field, (ForeignKey, ManyToManyField)):
            tmp = model.objects.filter(species__id=species.id).order_by(
                field_full_name + '__name').values(field_full_name).annotate(
                    count=Count(field_full_name))
        else:
            tmp = model.objects.filter(species__id=species.id).order_by(
                field_full_name).values(field_full_name).annotate(
                    count=Count(field_full_name))
        facets = []
        for facet in tmp:
            value = facet[field_full_name]
            if value is None or unicode(value) == '':
                continue

            if isinstance(field, (ForeignKey, ManyToManyField)):
                tmp2 = tmp_model.objects.values('wid', 'name').get(id=value)
                id = tmp2['wid']
                name = capfirst(tmp2['name'])
            elif (field.choices is not None) and (len(field.choices) > 0) and (
                    not isinstance(field, (BooleanField, NullBooleanField))):
                id = value
                choices = [x[0] for x in field.choices]
                if id in choices:
                    name = field.choices[choices.index(id)][1]
                else:
                    name = capfirst(value)
            else:
                id = value
                name = capfirst(value)
            if value is not None and unicode(value) != '':
                facets.append({
                    'id': unicode(id),
                    'name': unicode(name),
                    'count': facet['count']
                })
        if len(facets) > 1:
            facet_fields.append({
                'name': field_full_name,
                'verbose_name': field_verbose_name,
                'facets': facets,
            })

        #filter
        val = request.GET.get(field_full_name)
        if val:
            if isinstance(field, (ForeignKey, ManyToManyField)):
                kwargs = {field_full_name + '__wid': val}
            elif isinstance(field, (BooleanField, NullBooleanField)):
                kwargs = {field_full_name: val == 'True'}
            elif isinstance(field,
                            (AutoField, BigIntegerField, DecimalField,
                             FloatField, IntegerField, PositiveIntegerField,
                             PositiveSmallIntegerField, SmallIntegerField)):
                kwargs = {field_full_name: float(val)}
            else:
                kwargs = {field_full_name: val}
            objects = objects.filter(**kwargs)

    return render_queryset_to_response(species_wid=species_wid,
                                       request=request,
                                       models=[model],
                                       queryset=objects,
                                       templateFile='public/list.html',
                                       data={
                                           'model_type':
                                           model_type,
                                           'model_verbose_name':
                                           model._meta.verbose_name,
                                           'model_verbose_name_plural':
                                           model._meta.verbose_name_plural,
                                           'facet_fields':
                                           facet_fields,
                                       })