def testReadFile(self): filename = get_current_module_path(__file__, "../emmff/spectra/spectrum1.emsa") self.emsa.open(filename) self.assertNotEqual(0, len(self.emsa.lines)) self.assertEqual(1054, len(self.emsa.lines)) filename = get_current_module_path(__file__, "../emmff/spectra/BadFile.emsa") self.assertRaises(IOError, self.emsa.open, filename)
def setUp(self): unittest.TestCase.setUp(self) self.filepath = get_current_module_path(__file__, "../../test_data/k3670_30keV_OFeCalibration.csp") if not is_test_data_file(self.filepath): raise SkipTest self.gpFile = genesisPolarisFile.GenesisPolarisFile()
def setUp(self): unittest.TestCase.setUp(self) self.filepath = get_current_module_path(__file__, "../../test_data/test01.trc") if not is_test_data_file(self.filepath): raise SkipTest self.traceFile = TraceFile.TraceFile(self.filepath)
def setUp(self): """ Setup method. """ unittest.TestCase.setUp(self) self.path = get_current_module_path( __file__, "../../../test_data/Bruker/MapRaw")
def setUp(self): unittest.TestCase.setUp(self) self.filepath = get_current_module_path( __file__, "../emmff/spectra/spectrum1.emsa") if not os.path.isfile(self.filepath): raise SkipTest self.emsa = emsaFormat.EmsaFormat(self.filepath)
def setUp(self): unittest.TestCase.setUp(self) self.filepath = get_current_module_path( __file__, "../../../test_data/SpectrumProcessing 10.txt") if not is_test_data_file(self.filepath): raise SkipTest self.results = ReadSpectrumProcessingResults.ReadSpectrumProcessingResults( self.filepath)
def setUp(self): unittest.TestCase.setUp(self) self.filepathRef = get_current_module_path(__file__, "../../test_data/TEM_Edax/OVERALL.CSV") if not is_test_data_file(self.filepathRef): raise SkipTest self.data = TemCsvFile.TemCsvFile(self.filepathRef) self.numberPoints = 1024
def setUp(self): """ Setup method. """ unittest.TestCase.setUp(self) self.path = get_current_module_path( __file__, "../../../test_data/OxfordInstruments/MapRaw") if not os.path.isdir(self.path): raise SkipTest
def setUp(self): unittest.TestCase.setUp(self) filepath = get_current_module_path(__file__, "spectra/spectrum1.emsa") if not os.path.isfile(filepath): raise SkipTest if PY3: with open(filepath, 'r', newline="\r\n") as f: self.emsa = emsa.read(f) elif PY2: with open(filepath, 'rb') as f: self.emsa = emsa.read(f)
def setUp(self): warnings.simplefilter("ignore") unittest.TestCase.setUp(self) projectPath = get_current_module_path(__file__) self.filename = os.path.join(projectPath, "../../test_data/data0407.ful") if not is_test_data_file(self.filename): raise SkipTest self.linescanFile = JEOL8900McGill.JEOL8900McGill(self.filename)
def testReadlines(self): emsa = emsaFormat.EmsaFormat() filename = get_current_module_path(__file__, "../emmff/spectra/spectrum1.emsa") emsa.open(filename) emsa.readLines() self.assertEquals(30, len(emsa.keywords)) self.assertEquals(1024, len(emsa.values))
def test_isValidFile(self): folderpath = get_current_module_path(__file__, "../../../test_data") filepath = os.path.join(folderpath, "SpectrumFullResults 10.txt") self.assertEquals(True, ReadSpectrumFullResults.isValidFile(filepath)) filepath = os.path.join(folderpath, "SpectrumProcessing 10.txt") self.assertEquals(False, ReadSpectrumFullResults.isValidFile(filepath)) filepath = os.path.join(folderpath, "AllSpectra.txt") self.assertEquals(False, ReadSpectrumFullResults.isValidFile(filepath)) #self.fail("Test if the TestCase is working.") self.assertTrue(True)
def testReadFileTEMBruker(self): filename = get_current_module_path( __file__, "../../test_data/TEM_Bruker/Gold-pt 2-2.msa") if not os.path.isfile(filename): raise SkipTest emsa = emsaFormat.EmsaFormat() emsa.open(filename) emsa.readLines() emsa.setHeader() emsa.setSpectrumData() self.assertNotEqual(0, len(emsa.lines)) self.assertEqual(1055, len(emsa.lines)) self.assertEqual(1024, len(emsa.values)) self.assertEqual(4096, len(emsa.getDataX())) self.assertEqual(4096, len(emsa.getDataY()))
def test_is_test_data_file(self): self.assertFalse(is_test_data_file(self.file_path)) self.assertFalse(is_test_data_file(get_current_module_path(__file__))) self.assertTrue(is_test_data_file(__file__))
def setUp(self): unittest.TestCase.setUp(self) self.file_path = get_current_module_path(__file__, "../test_data/lfs_test_file.txt") if not os.path.isfile(self.file_path): raise SkipTest