def load_rest_to_colin(): args = fmri.read_cmd_args(['-s', subject]) args.task = 'REST' args.function = 'project_volume_to_surface,find_clusters' args.contrast = 'rest' args.volume_name = 'spmT_0001' fmri.main(subject, mri_subject, args)
def fsfast(): args = fmri.read_cmd_args(['-s', subject]) args.task = 'MSIT' args.function = 'fmri_pipeline' args.contrast_name = 'interference' args.atlas = 'laus250' fmri.main(subject, mri_subject, args)
def pet(): args = fmri.read_cmd_args(['-s', subject]) args.threshold = 0 args.is_pet = True args.symetric_colors = False args.atlas = 'laus250' fmri.main(subject, mri_subject, args) '-s s02 --threshold 0 --is_pet 1 --symetric_colors 0 --overwrite_surf_data 1 --remote_subject_dir /local_mount/space/thibault/1/users/npeled/artur/recon_tese/{subject}'