Name		Name	Last commit message	Last commit date
Latest commit History 76 Commits
runsvscore		runsvscore
.gitignore		.gitignore
README.md		README.md
annotations.sh		annotations.sh
benjamini.R		benjamini.R
bonferroni.R		bonferroni.R
caviar_full.sh		caviar_full.sh
check_beta.R		check_beta.R
clean_gs.py		clean_gs.py
expr_stats.py		expr_stats.py
expression.heatmap.R		expression.heatmap.R
gcta_full.sh		gcta_full.sh
get_beta.sh		get_beta.sh
get_logp.sh		get_logp.sh
get_pos_samples.py		get_pos_samples.py
grm.py		grm.py
gt_corr.py		gt_corr.py
gtex_row_stats.py		gtex_row_stats.py
ld.sh		ld.sh
ld_continuous.py		ld_continuous.py
liftOverBedpe.py		liftOverBedpe.py
lumpy_genome_strip_combine.py		lumpy_genome_strip_combine.py
mahalanobis.R		mahalanobis.R
manhattan_plot.R		manhattan_plot.R
outlier_enrichment.sh		outlier_enrichment.sh
para_sup10_scaled.sh		para_sup10_scaled.sh
peer.R		peer.R
pheno_samples.py		pheno_samples.py
qnorm.py		qnorm.py
rare_var_enrichment.sh		rare_var_enrichment.sh
row_stats.py		row_stats.py
run_matrixEQTL.R		run_matrixEQTL.R
run_matrixEQTL_for_caviar.R		run_matrixEQTL_for_caviar.R
scale_gt.py		scale_gt.py
svscore_consolidate.py		svscore_consolidate.py
t-stat.sh		t-stat.sh
var_gt_corr.py		var_gt_corr.py
vcfToBed.py		vcfToBed.py
vcf_allele_freq.py		vcf_allele_freq.py
vcf_allele_freq_gs.py		vcf_allele_freq_gs.py
vcf_covar.py		vcf_covar.py

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