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A bunch of python2.7 scripts and modules to do some common tasks, very messy

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genTools

A bunch of python2.7 scripts and modules to do some common tasks, very messy

modules

The most valuable: statsUtil, contains some of my commonly used statistic tools. stand alone other than: import numpy as np import scipy.stats as stats import scipy.linalg import operator as op import itertools

dataUtil, some occasionally valuable data operations stand alone other than: import numpy as np from operator import itemgetter

manageData, useful for microarray data, but its customized more my own purpose and not well documented or commented.

cvTools, was valuable for me, but I then found that most of this can be implemented easier by scipy and numpy built in functions.

license

Copyright (C) 2003-2013 Institute for Systems Biology Seattle, Washington, USA.

This library is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either version 2.1 of the License, or (at your option) any later version.

This library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details.

You should have received a copy of the GNU Lesser General Public License along with this library; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA

20120904 RAT

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A bunch of python2.7 scripts and modules to do some common tasks, very messy

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