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solver.py
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solver.py
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import ipt
import time
import os
import logging
import mxnet as mx
import numpy as np
import mxnet.ndarray as nd
import matplotlib.pyplot as plt
import os
import pickle as pk
from PIL import Image
import copy
import json
import RNN
import CNN
import sys
from my_utils import *
class Solver():
def __init__(self, net, train_data, sks, **kwargs):
"""sks is the dict of config of solver whereas other args and kwargs will be passed into net"""
k = kwargs.copy()
self.net = net
# prepare Train_data
self.train_data = train_data
if isinstance(train_data, mx.io.DataIter):
self.batch_size = train_data.batch_size
else:
self.batch_size = k.pop(
'numpy_batch_size', min(train_data.shape[0], 128))
k['numpy_batch_size'] = self.batch_size
# init params
self.num_epoch = k['num_epoch']
self.reset()
sks_bk = sks.copy()
self.sks = sks
# whether draw outputs of every forward step
# self.draw_each = k.pop('draw_each', False)
# whether save prediction to pk files
# self.save_pred = k.pop('save_pred', False)
self.save_best = self.sks.pop('save_best', True)
self.block_bn = self.sks.pop('block_bn', False)
self.is_rnn = self.sks.pop('is_rnn', False)
self.lgr = self.sks.pop('logger', None)
self.keep_gamma = self.sks.pop('keep_gamma', True)
# make name and save_dir
now = time.ctime(int(time.time()))
now = now.split(' ')
name = self.sks.pop('name', None)
self.name = '<' + now[-3] + '-' + now[-2] + '>'
if name is not None:
self.name += name
self.path = 'Result/' + self.name + '[E%d]/' % self.num_epoch
try:
os.mkdir(self.path)
except OSError, e:
print e, 'ecountered'
# config logging
if self.lgr is None:
self._init_log()
self.lgr.info(self.name)
# save kwargs to file
self.save_kwargs(sks_bk, kwargs)
# store kwargs
self.kwargs = k
self.origin_k = kwargs
self.origin_s = sks_bk
def _init_log(self):
logging.basicConfig(level=logging.DEBUG, filename=self.path +
'LOG.txt', format='%(levelname)s:%(message)s')
logger = logging.getLogger('')
formatter = logging.Formatter('%(levelname)s:%(message)s')
console = logging.StreamHandler(sys.stdout)
console.setLevel(logging.INFO)
console.setFormatter(formatter)
logger.addHandler(console)
self.lgr = logger
def reset(self):
self.acc_hist = {}
self.arg = {}
self.best_acc = 0
self.best_param = None
self.nbatch = -1
self.nepoch = -1
self.param_grad = {}
self.param_name = None
self.count = 0
self.model = None
def save_kwargs(self, s, k):
save_k = k.copy()
with open(self.path + "SolverParam.json", 'w') as f:
save_k.pop('eval_data', None)
ctx = save_k['ctx']
ctx = [ctx] if not isinstance(ctx, list) else ctx
save_k['ctx'] = ctx.__str__()
save_k.pop('initializer', None)
save_k.pop('logger', None)
if self.is_rnn:
save_k['marks'] = save_k['marks'].__str__()
if 'e_marks' in save_k:
save_k['e_marks'] = save_k['e_marks'].__str__()
json.dump(s, f, indent=4, sort_keys=True)
json.dump(save_k, f, indent=4, sort_keys=True)
def _draw_together(self, preds, labels, perfix):
gap = np.ones((256, 5))
if isinstance(preds, mx.ndarray.NDArray):
preds = preds.asnumpy()
if isinstance(labels, mx.ndarray.NDArray):
labels = labels.asnumpy()
N = preds.shape[0]
for i in range(N):
pic = np.hstack([preds[i, 0], gap, labels[i, 0]])
plt.imsave(self.path + perfix + '~N%d.png' % i, pic)
plt.close('all')
def eval(self, label, pred):
pred = copy.deepcopy(pred)
conjunct = pred * label
union = pred + label
out = np.sum(conjunct * 2) / np.sum(union)
self.lgr.debug('---------EVAL, mean of prediciton %f, truth %f, iou %f--------' %
(pred.mean(), label.mean(), out))
if self.sks.pop('draw_each', False):
self._draw_together(
pred, label, 'Evaluation[E%d-B%d]-#%d' % (self.nepoch, self.nbatch, self.count))
if self.sks.pop('save_pred', False):
with open(self.path + 'pk[E%d-B%d]-#%d.pk' % (self.nepoch, self.nbatch, self.count), 'w') as f:
pk.dump(pred, f)
pk.dump(label, f)
self.count += 1
if not 0 <= out <= 1:
self.lgr.warning('eval error >>%f %f %f' %
(out, np.sum(conjunct), np.sum(union)))
return out
def time_step(self, params):
"""t, m, eval_metric, locals"""
t, m = params[:2]
if m != 1:
return
manager = params[3]['executor_manager']
if self.param_name is None:
self.param_name = manager.param_names
for i, n in enumerate(self.param_name):
ps = params[3]['executor_manager'].param_arrays[i]
gs = params[3]['executor_manager'].grad_arrays[i]
for j, p in enumerate(ps):
if 'gamma' in n and self.keep_gamma and 'wd' in self.origin_k:
wd = self.origin_k['wd']
lr = self.origin_k['learning_rate']
g = params[3]['executor_manager'].grad_arrays[i][j]
old_p_decay = p + lr * g
old_p = old_p_decay / (1 - lr * wd)
params[3]['executor_manager'].param_arrays[
i][j][:] = (old_p - lr * g) / p
# regularzation on LSTM
if n in ['rnn_i2h_weight', 'rnn_i2h_weight'] and True:
lr = self.origin_k['learning_rate']
wd = 5e-7 / lr
params[3]['executor_manager'].param_arrays[i][j][:] -= wd * p
def batch(self, params):
"""epoch, nbatch, eval_metric, locals """
self.nbatch = params[1]
manager = params[3]['executor_manager']
if self.param_name is None:
self.param_name = manager.param_names
for i, n in enumerate(self.param_name):
ps = params[3]['executor_manager'].param_arrays[i]
gs = params[3]['executor_manager'].grad_arrays[i]
psum = None
gsum = None
# for the same param on different gpu
# operation for param
for j, p in enumerate(ps):
# if necessary, fix beta in batch norm
if 'beta' in n and self.block_bn and not self.is_rnn:
params[3]['executor_manager'].param_arrays[i][j][:] = 0 * p
mean = p.asnumpy().mean()
if mean >= 5 or mean <= -5:
self.lgr.warning('%n is NOT right =>%f', n, mean)
if 'gamma' in n and self.keep_gamma and 'wd' in self.origin_k and not self.is_rnn:
wd = self.origin_k['wd']
lr = self.origin_k['learning_rate']
g = params[3]['executor_manager'].grad_arrays[i][j]
old_p_decay = p + lr * g
old_p = old_p_decay / (1 - lr * wd)
params[3]['executor_manager'].param_arrays[
i][j][:] = (old_p - lr * g) / p
if psum is None:
psum = p.asnumpy()
else:
psum += p.asnumpy()
# print params' means
# self.lgr.debug('[B%d %s]> %f', self.nbatch, n, psum.mean())
# save param
if n not in self.param_grad.keys():
self.param_grad[n] = [[psum.mean()], []]
else:
self.param_grad[n][0].append(psum.mean())
# operation for grad
for g in gs:
if gsum is None:
gsum = g.asnumpy()
else:
gsum += g.asnumpy()
# save grad
self.param_grad[n][1].append(gsum.mean())
def eval_batch(self, params):
local = params[3]
preds = local['executor_manager'].curr_execgrp.train_execs[
0].outputs[0]
labels = local['eval_batch'].label[0]
self._draw_together(
preds, labels, 'EVAL[E%d-B%d]' % (params[0], params[1]))
def epoch(self, epoch, symbol, arg_params, aux_params, acc):
self.acc_hist[epoch] = acc
self.arg[epoch] = arg_params
self.nepoch = epoch
# print 'Epoch[%d] Train accuracy: %f' % (epoch, np.sum(acc) /
this_acc = np.sum(acc) / float(len(acc))
self.lgr.info('Epoch[%d] T acc: %f', epoch, this_acc)
if self.save_best and \
(self.best_param is None or this_acc > self.best_acc):
self.best_param = (epoch, symbol, arg_params, aux_params)
self.best_acc = this_acc
def plot_process(self):
"""
self.param_grad is a dict containning a list of each params
for each list, the first item is a list of all params, the second item is a list of a grad
"""
names = self.param_name
path = self.path + 'Insight/'
os.mkdir(path)
for i, n in enumerate(names):
fig = plt.figure()
param, grad = self.param_grad[n]
# when using more than one gpu, weight are in differnt gpus
mean_param = param # [ x.mean() for x in param ]
mean_grad = grad # [ x.mean() for x in grad]
fig.add_subplot(1, 2, 1).plot(mean_param, marker='o')
fig.add_subplot(1, 2, 2).plot(mean_grad, marker='o')
fig.suptitle(n + ' Param:Grad')
fig.savefig(path + n + '.png')
fig.clear()
plt.close('all')
def save_best_model(self):
if self.best_param is None or self.best_acc == 0:
print 'No Best Model'
return
from mxnet.model import save_checkpoint
save_checkpoint("%s[ACC-%0.5f E%d]" %
(self.path, self.best_acc, self.best_param[0]), *self.best_param)
def get_acc_list(self):
l = []
for k in sorted(self.acc_hist.keys()):
l += self.acc_hist[k]
return l
def each_to_png(self):
for k in sorted(self.acc_hist.keys()):
plt.plot(self.acc_hist[k], marker='o')
path = os.path.join(self.path, 'acc_his-' + str(k) + '.png')
plt.savefig(path)
plt.close()
def all_to_png(self):
l = []
for k in sorted(self.acc_hist.keys()):
average = np.mean(self.acc_hist[k])
l.append(average)
plt.plot(l, marker='o')
path = os.path.join(self.path, 'acc_his-all.png')
plt.savefig(path)
plt.close()
def _init_model(self):
if self.is_rnn:
from RNN import rnn_feed
if self.sks.pop('load', False):
self.lgr.info('Load from Old RNN')
perfix = self.sks['load_perfix']
epoch = self.sks['load_epoch']
self.model = rnn_feed.Feed.load(perfix, epoch, **self.kwargs)
self.model.begin_epoch = 0
elif self.sks.pop('load_from_cnn', False):
self.lgr.info('Load from Old CNN')
perfix = self.sks['load_perfix']
epoch = self.sks['load_epoch']
shape = dict(self.train_data.provide_data +
self.train_data.provide_label)
self.model = rnn_feed.Feed.load_from_cnn(
perfix, epoch, self.net, shape, **self.kwargs)
self.model.begin_epoch = 0
else:
self.model = rnn_feed.Feed(self.net, **self.kwargs)
else:
if self.sks.pop('load', False):
self.lgr.info('Load from Old CNN')
perfix = self.sks['load_perfix']
epoch = self.sks['load_epoch']
self.model = mx.model.FeedForward.load(
perfix, epoch, **self.kwargs)
self.model.begin_epoch = 0
else:
self.model = mx.model.FeedForward(self.net, **self.kwargs)
def train(self):
kwords = {
'kvstore': 'local',
'eval_metric': self.eval,
'epoch_end_callback': self.epoch,
'batch_end_callback': self.batch,
#'eval_batch_end_callback': self.eval_batch,
}
for term in ['y', 'eval_data', 'logger', 'work_load_list', 'monitor']:
if term in self.kwargs.keys():
kwords[term] = self.kwargs.pop(term)
if self.is_rnn:
kwords['e_marks'] = self.kwargs.pop('e_marks', None)
marks = self.kwargs.pop('marks')
from RNN import rnn_metric
kwords['eval_metric'] = rnn_metric.RnnM(self.eval)
kwords['time_step_callback'] = self.time_step
# prepare and train
self._init_model()
if self.is_rnn:
self.model.fit(self.train_data, marks, logger=self.lgr, **kwords)
else:
self.model.fit(self.train_data, logger=self.lgr, **kwords)
self.all_to_png()
self.plot_process()
if self.save_best:
self.save_best_model()
def predict(self):
if 'eval_data' in self.origin_k.keys():
X = self.origin_k['eval_data']
else:
X = self.train_data
self.lgr.warning('No Eval Data, Using Training Data')
# if not train, directly predict, -> init model
if self.model is None:
for term in ['y', 'eval_data', 'logger', 'work_load_list', 'monitor', 'marks', 'e_marks']:
if term in self.kwargs.keys():
self.kwargs.pop(term)
self._init_model()
if self.model.arg_params is None:
d = X.provide_data
l = X.provide_label
self.model._init_params(dict(d + l))
out = self.model.predict(X, return_data=True)
out = list(out)
if self.is_rnn:
self.lgr.debug('Prediction Done, reshape rnn outputs')
out[0] = out[0][0].reshape((-1, 1) + out[0][0].shape[-2:])
out[1] = out[1].reshape((-1, 1) + out[1].shape[-2:])
out[2] = out[2].reshape((-1, 1) + out[2].shape[-2:])
N = out[0].shape[0]
H = out[0].shape[2]
for idx in range(N):
gap = np.ones((H, 5))
pred = out[0][idx, 0]
img = out[1][idx, 0]
label = out[2][idx, 0]
png = np.hstack([pred, gap, label])
self.lgr.debug('Prediction mean>>%f Label mean>>%f',
pred.mean(), label.mean())
fig = plt.figure()
fig.add_subplot(121).imshow(png)
fig.add_subplot(122).imshow(img)
fig.savefig(self.path + 'Pred[%d].png' % (idx))
fig.clear()
plt.close('all')