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ClinicalRegex

Download Git

git clone latest code from master branch at https://github.com/bsipin20/ClinicalRegex.git

Install dependencies

Open terminal on mac (press command + space and type in terminal and hit enter) Type following commands sequentially

$ cd ~/Desktop/DukeClinicalRegexTest-master/

$ sudo easy_install pip

$ pip3 install -r requirements.txt

Start Program

$ python3 src/main.py

Installation

Please download dropbox link alt text

Once downloaded please go to downloads folder and click ClinicalRegexv1.1 to start the program alt text

Windows defender may try to prevent the program from opening but please Run Anyway alt text

The Graphical user interface will open and please hit select file alt text

Please select an RPDR format file to be searched by the program alt text

Type in text to be searched in each RPDR note and press the "Run Regex" button alt text

The program will then go through each note. Enter annotated value, press "Save" and then hit "Next" at the top of the screen alt text

Repeat this through each note until the end of the file

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