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CHARMMing Python Library for bookkeeping (referenced at pychm in CHARMMing)
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jo-sm/charmminglib
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CHARMMing Python Library 0.2 README =================================== Table of Contents: * License * Description * Dependencies * Installation Directions * Authors Licence ------- PUBLIC DOMAIN NOTICE This software/database is a "United States Government Work" under the terms of the United States Copyright Act. It was written as part of the authors' official duties as a United States Government employee and thus cannot be copyrighted. This software is freely available to the public for use. There is no restriction on its use or reproduction. Although all reasonable efforts have been taken to ensure the accuracy and reliability of the software and data, NIH and the U.S. Government do not and cannot warrant the performance or results that may be obtained by using this software or data. NIH, NHLBI, and the U.S. Government disclaim all warranties, express or implied, including warranties of performance, merchantability or fitness for any particular purpose. Description ----------- The CHARMMing Python Library is a package used by CHARMMing to handle the bookkeeping tasts often required in complex molecular simulations. It is meant to automate repetitive tasks, and make the potentially painful world of CHARMM less so. The CPyL is _not_ meant in any way to replicate the functionality of other programs such a openbabel or MTSB. This is a package written by CHARMMing developers for CHARMMing developers. More information can be found at http://www.charmming.org Dependencies ------------ * Python (2.6 <= ver < 3.0) - With some (minor) modifications to the source, it is possible to use ver >=2.4. * Numpy (tested on ver 1.2.1, use earlier versions at your own peril) Installation Directions ----------------------- To install as a local site package, from the shell, execute the following: % ./setup.py build % ./setup.py install --user To install machine wide (requires root), execute the following: % ./setup.py build % ./setup.py install Authors ------- CHARMMing Python Library 0.2 Frank C. Pickard IV Laboratory of Computational Biology National Heart, Lung and Blood Institute National Institutes of Health 5635 Fishers Lane Rockville, MD 20852 CHARMMing B. Timothy Miller Laboratory of Computational Biology National Heart, Lung and Blood Institute National Institutes of Health 5635 Fishers Lane Rockville, MD 20852 H. Lee Woodcock III Deparment of Chemistry University of South Florida 4204 E. Fowler Avenue, CHE 205 Tampa, FL 33620
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