openSBML plugin for Spyder 3.0+

spyder-openSBML is a plugin for Spyder IDE version 3 and over.

The plugin adds a function to directly open SBML files and create an editor window with the contents of SBML file translated to Antimony language for added readability. The plugin also generates default template for Tellurium by placing Antimony model in Tellurim.loada function, which loads Antimony model into a new RoadRunner instance.

To install, obtain the source, go to the folder where source is located and run:

pip install .

spyder-openSBML requires Spyder IDE, Tellurium, and all of its dependencies. Tellurium is not available on PyPI yet and the dependency requirement is not enforced, so manual installation for Tellurium is required.