python DicomSeriesReadImageWrite.py --server=innovador.ini
- storescp obtained from Slicer4
- http://support.dcmtk.org/docs/storescp.html
- python vtk bindings obtained from EPD 7.3.1
cmake -DCMAKE_CXX_COMPILER=/usr/bin/g++-4.4 -DCMAKE_C_COMPILER=/usr/bin/gcc-4.4 -DBUILD_SHARED_LIBS=ON -DCMAKE_BUILD_TYPE=Debug -DBUILD_EXAMPLES=ON -DBUILD_TESTING=OFF -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_PREFIX=$ITK_HOME -DITK_WRAP_PYTHON=ON -DINSTALL_WRAP_ITK_COMPATIBILITY=OFF -DITK_WRAP_double=ON -DITK_USE_SYSTEM_SWIG=ON -DPYTHON_EXECUTABLE=$EPD_ROOT/bin/python -DPYTHON_INCLUDE_DIR=$EPD_ROOT/include/python2.7 -DPYTHON_LIBRARY=$EPD_ROOT/lib/libpython2.7.so ../InsightToolkit-4.3.1
findscu -P -k 0008,0052=STUDY -aet -aec IPAddress Port# -k 0010,0020= -k 0020,000d -k 0008,1030 -k 0008,0020 -k 0008,0050 findscu -S -k 0008,0052=SERIES -aet -aec IPAddress Port# -k 0020,000D= -k 0020,000E -k 0008,0060 -k 0010,0020= -k 0008,103e movescu -v -S -k 0008,0052=SERIES -aet -aec IPAddress Port# -k 0020,000D= -k 0020,000e=
python convertExodusToMatlab.py --ini_file=dog1.ini
all mesh file names, imaging parameters, and affine transformation parameters should be in the ini file
and example ini file is given in dog1.ini: adjust work_dir, mesh_filenames, etc accordingly