Snakemake

The Snakemake workflow management system is a tool to create reproducible and scalable data analyses. Workflows are described via a human readable, Python based language. They can be seamlessly scaled to server, cluster, grid and cloud environments without the need to modify the workflow definition. Finally, Snakemake workflows can entail a description of required software, which will be automatically deployed to any execution environment.

Homepage: https://snakemake.readthedocs.io

Note: Snakemake has just (Oct 4 2019) moved from bitbucket.org/snakemake/snakemake to Github. Forks and stars are not yet insightful here!

Name		Name	Last commit message	Last commit date
Latest commit History 3,906 Commits
.github		.github
docs		docs
examples		examples
images		images
misc		misc
snakemake		snakemake
tests		tests
.dockerignore		.dockerignore
.gitattributes		.gitattributes
.gitignore		.gitignore
.readthedocs.yml		.readthedocs.yml
.sonarcloud.properties		.sonarcloud.properties
AUTHORS.rst		AUTHORS.rst
CHANGELOG.rst		CHANGELOG.rst
CODE_OF_CONDUCT.md		CODE_OF_CONDUCT.md
Dockerfile		Dockerfile
LICENSE.md		LICENSE.md
MANIFEST.in		MANIFEST.in
README.md		README.md
doc-environment.yml		doc-environment.yml
format.sh		format.sh
motoState.p		motoState.p
setup.cfg		setup.cfg
setup.py		setup.py
test-environment.yml		test-environment.yml
versioneer.py		versioneer.py

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skchronicles/snakemake

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