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RONN

This is a repackaged version of RONN 3.2 after significant rewrite (3.3) and wrapping to be directly called as a Python extension. The codebase is thoroughly regression-tested; disorder scores are the same as predicted by RONN 3.2.

Installation

Stable releases version from PyPI

pip install pyRONN

Development version from Github

pip install git+https://github.com/smsaladi/pyRONN.git

History

RONN 3.2

This program is designed for for detecting disordered residues in proteins.

Date: March 2012

Designer: Zheng Rong Yang (Exeter University)

Programmer: Varun Ramraj (University of Oxford)

Contact: varun@strubi.ox.ac.uk

RONN 3.3

Substantial modifications to speed up code as well as facilitate wrapping with Python (or any other language). Can now also handle multiple FASTA-formatted records in an input file. Path to data directory must be specified as a command-line argument if not located at ../data with respect to the executable file.

Date: Sept 2016

Author: Shyam Saladi (California Institute of Technology)

Contact: saladi@caltech.edu