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GimmeMotifs is a de novo motif prediction pipeline, especially suited for ChIP-seq datasets. It incorporates several existing motif prediction algorithms in an ensemble method to predict motifs and clusters these motifs using the WIC similarity scoring metric.
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verdurin/gimmemotifs
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See the GimmeMotifs documentation included in this package or at http://ncmls.eu/bioinfo/gimmemotifs/ for detailed installation instructions and usage examples.
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GimmeMotifs is a de novo motif prediction pipeline, especially suited for ChIP-seq datasets. It incorporates several existing motif prediction algorithms in an ensemble method to predict motifs and clusters these motifs using the WIC similarity scoring metric.
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