import scipy.io import affinity reload(affinity) import bintree_cut reload(bintree_cut) reload(bintree_cut.tree) mdict = scipy.io.loadmat('/users/jerrod/Google Drive/Yale_Research/Questionnaire_2D_20130614/Examples/MMPI2.mat') data = mdict['matrix'] sim_mat = affinity.norm_ip_abs_raw(data) vecs,vals = bintree_cut.markov_eigs(sim_mat,8)