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alt tag v0.1

Overview:

The TreeFindr project is aimed at providing an open-source pathway to estimating forest biometrics from rasterized forest height profiles. It is currently in the early stages of development as a QGIS script with an accuracy assessment in R.

Using the QGIS plugin:

alt tag

  1. Plot Code:

Used to identify outputs. Can be any string, in this case the format is two letters followed by a number.

  1. DSM:

The digital surface model layer. A raster height map featuring vegetation.

  1. Mask Image:

(Optional) A binary raster image that indicates desired image regions to include in analysis (Include = 1, Exclude = 2). Must ensure 'Use Mask' option is checked in order to use.

  1. Segmentation Threshold:

(Default = 4) Seed to saddle difference in watershed segmentation. Higher values result in more segments merging together.

  1. Clean Threshold:

(Default = 1.4) Threshold for v.clean algorithm. Higher values result in fewer remaining small areas.

  1. Set temp Directory:

Choose desired directory to store intermediate files. I have never tried not using this so the 'optional' tag may in fact be incorrect. Useful for identifying the source of errors in the processing pathway.

  1. Tree Crowns:

The output vector layer indicating tree crown areas.

  1. Stem Estimations:

The output vector layer indicating estimated stem locations as points.

Notes

  • Only tested with ENVI formatted height profile as input height field. For some reason does not work with BCAL lidar height profile outputs.
  • Reqires the OSGeo4W and SAGA modules to be properly installed within QGIS.
Logo Information:

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QGIS processing chain that converts forest DSM images to tree crown polygons

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