#Open PHACTS Explorer 2

The BioPathway_OPS Explorer is a visualization tool for biopathway based on Open PHACTS Explorer published by ianwdunlop.

The Open PHACTS Explorer is an HTML5 & CSS3 application for chemical information discovery and browsing. It is used to search for chemical compound and target information using a web search interface. It uses Ruby on Rails, Ember JS and OPS.JS. The Explorer uses the Open PHACTS Linked Data API.

And BioPathway_OPS Explorer is adding pathway search and visualization function to Open PHACTS Explorer.

The steps of setup this system is in https://github.com/openphacts/explorer2.

Following files are adding files to Open PHACTS Explorer.

/app/assets/javascripts/combined.js
//OPS API

/app/assets/javascripts/biosearchRoutes.js
//setting up biosearch route which is the important view part

/app/assets/javascripts/d3sparql.js
//response for getting remote data and visualizing

/app/assets/javascripts/mycompound.js
//making chemical report

/app/assets/javascripts/d3-tip.min.js
//d3-tip

/app/assets/javascripts/d3-hierarchy.v1.min.js
//d3-hierarchy plug for packing in d3sparql

/app/assets/javascripts/controllers/biosearchController.js
//the controller of biosearch

/app/assets/javascripts/controllers/biosearchIndexController.js
//the controller of biosearchIndex

/app/assets/javascripts/controllers/math.min.js
//math functions

/app/assets/javascripts/templates/biosearch/*
//the templates

/app/controllers/biosearch_controller.rb
//the ruby file for biosearch controller

/app/views/layouts/biosearch.html.erb
//the view layout of biosearch

/app/views/biosearch/*
//the view files for biosearch

Following files are updating files to Open PHACTS Explorer.

/app/assets/javascripts/routes.js
//updating routes on biosearch

/app/assets/javascripts/routeSetup.js
//updating routeSetup on biosearch

/app/assets/javascripts/application.js
//stopping turbolink and uploading corresponding files