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PAIP2019: Liver Cancer Segmentation

PAIP2019 is the liver cancer segmentation challeng, held as a part of MICCAI2019.

The objective of the challenge is to assess advanced computer algorithms for an automated evaluation of liver cancer in whole-slide images (WSIs). It includes two tasks: 1) Task 1: Liver Cancer Segmentation, and 2) Task 2: Viable Tumor Burden Estimation.

This repository contains the deep learing-based methods that we developed for the challenge.

The methods were ranked 5th and 3rd for Task 1 and 2, respectively.


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classification

: This file is for training classification model

preprocessing

: This file is for generating patches for training

overlap_prediction

: this file is for prediction

segmentation

: This file is for training segmentation model

test_result

: This file is test result after removing samll componenets by using connected components

Result img


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