Skip to content

smlacava/neuropredict

 
 

Repository files navigation

neuropredict

travis Code Health Codacy Badge PyPI version [Python versions]

saythanks

News

  • Good news: neuropredict can handle missing data now (that are encoded with numpy.NaN). This is done respecting the cross-validation splits without any data leakage.

Overview

On a high level,

roleofneuropredict

On a more detailed level,

roleofneuropredict

Long term goals

neuropredict, the tool, is part of a broader initiative described below to develop easy, comprehensive and standardized predictive analysis:

longtermgoals

Citation

If neuropredict helped you in your research in one way or another, please consider citing one or more of the following, which were essential building blocks of neuropredict:

  • Pradeep Reddy Raamana. (2017, November 18). neuropredict: easy machine learning and standardized predictive analysis of biomarkers (Version 0.4.5). Zenodo. http://doi.org/10.5281/zenodo.1058993
  • Raamana et al, (2017), Python class defining a machine learning dataset ensuring key-based correspondence and maintaining integrity, Journal of Open Source Software, 2(17), 382, doi:10.21105/joss.00382

Change Log - version 0.5.2

  • Imputation of missing values
  • Additional classifiers such as XGBoost, Decision Trees
  • Better internal code structure
  • Lot more tests
  • More precise tests, as we vary number of classes wildly in test suites
  • several bug fixes and enhancements
  • More cmd line options such as --print_options from a previous run

About

Easy and comprehensive assessment of predictive power, with support for neuroimaging features

Resources

License

Code of conduct

Stars

Watchers

Forks

Packages

No packages published

Languages

  • Python 99.2%
  • Makefile 0.8%