• Pre-analyzed electrophysiological data

  the intracellular recordings in current clamp, ~10 GBytes over all cells, have been reduced to a set of episodes containing 1) the desired fluctuations properties, 2) the monitored quantities and 3) the output firing rate, see the manuscript for details

• python code for the data analysis and theoretical modeling

• manuscript in org mode to be exported in pdf

• doit : the automation tool in python, see http://pydoit.org/

• scientific distribution of python (e.g. anaconda, visit https://www.continuum.io/downloads) needed packages :

  • numpy
  • scipy
  • numba
  • matplotlib

Go to the 'numerical simulations/' folder and run 'doit'

see the individual commands executed with comments in the 'numerical_simulations/dodo.py' file

Go to the 'analysis/' folder and run 'doit'

see the individual commands executed with comments in the 'analysis/dodo.py' file

• pdflatex
• emacs > 24.5.0, get it from https://www.gnu.org/software/emacs/#Obtaining

run 'doit' in the root folder and see individual functions for details