def __init__(self,
parentWidget,
title='',
labelList=[],
alignment=None,
isBold=False):
"""
Appends a PM_LabelGrid widget ( a groupbox) to the bottom of I{parentWidget},
the Property Manager Group box.
@param parentWidget: The parent group box containing this widget.
@type parentWidget: PM_GroupBox
@param title: The group box title.
@type title: str
@param labelList: A list of I{label info lists}. There is one label
info list for each label in the grid. The label
info list contains the following items:
1. Widget Type - in this case its 'Label'(str),
2. Label text (str),
3. Column (int),
4. Row (int).
@type labelList: list
"""
self.isBold = isBold
#Empty list that will contain all the labels in this widget.
self.labels = []
PM_WidgetGrid.__init__(self, parentWidget, title, labelList, alignment)
def __init__(self,
parentWidget,
title = '',
widgetList = [],
alignment = None,
label = '',
labelColumn = 0,
spanWidth = False
):
"""
Appends a PM_WidgetRow (a group box widget) to the bottom of
I{parentWidget},the Property Manager Group box.
@param parentWidget: The parent group box containing this widget.
@type parentWidget: L{PM_GroupBox}
@param title: The group box title.
@type title: str
@param widgetList: A list of I{widget info lists}. There is one widget
info list for each widget in the grid. The widget
info list contains custom information about the
widget but the following items are always present:
- First Item : Widget Type (str),
- Second Last Item : Column (int),
- Last Item : Row (int).
@type widgetList: list
@param alignment: The alignment of the widget row in the parent
groupbox. Based on its value,spacer items is added
to the grid layout of the parent groupbox.
@type alignment: str
@param label: The label for the widget row. .
@type label: str
@param labelColumn: The column in the parentWidget's grid layout to which
this widget's label will be added. The labelColum
can only be E{0} or E{1}
@type labelColumn: int
@param spanWidth: If True, the widget and its label will span the width
of the group box. Its label will appear directly above
the widget (unless the label is empty) and is left justified.
@type spanWidth: bool (default False)
"""
PM_WidgetGrid.__init__(self,
parentWidget ,
title,
widgetList,
alignment ,
label,
labelColumn,
spanWidth
)
def __init__(self,
parentWidget,
title='',
widgetList=[],
alignment=None,
label='',
labelColumn=0,
spanWidth=False):
"""
Appends a PM_WidgetRow (a group box widget) to the bottom of
I{parentWidget},the Property Manager Group box.
@param parentWidget: The parent group box containing this widget.
@type parentWidget: L{PM_GroupBox}
@param title: The group box title.
@type title: str
@param widgetList: A list of I{widget info lists}. There is one widget
info list for each widget in the grid. The widget
info list contains custom information about the
widget but the following items are always present:
- First Item : Widget Type (str),
- Second Last Item : Column (int),
- Last Item : Row (int).
@type widgetList: list
@param alignment: The alignment of the widget row in the parent
groupbox. Based on its value,spacer items is added
to the grid layout of the parent groupbox.
@type alignment: str
@param label: The label for the widget row. .
@type label: str
@param labelColumn: The column in the parentWidget's grid layout to which
this widget's label will be added. The labelColum
can only be E{0} or E{1}
@type labelColumn: int
@param spanWidth: If True, the widget and its label will span the width
of the group box. Its label will appear directly above
the widget (unless the label is empty) and is left justified.
@type spanWidth: bool (default False)
"""
PM_WidgetGrid.__init__(self, parentWidget, title, widgetList,
alignment, label, labelColumn, spanWidth)
def _loadGroupBox2(self, pmGroupBox):
"""
Load widgets in the second group box.
"""
self.headerdata_seq = ['', 'ID', 'Set', 'BR', 'Descriptor']
self.recenterViewCheckBox = \
PM_CheckBox( pmGroupBox,
text = "Re-center view on selected residue",
setAsDefault = True,
widgetColumn = 0,
state = Qt.Unchecked)
self.selectAllPushButton = PM_PushButton(pmGroupBox,
text="All",
setAsDefault=True)
self.selectAllPushButton.setFixedHeight(25)
self.selectNonePushButton = PM_PushButton(pmGroupBox,
text="None",
setAsDefault=True)
self.selectNonePushButton.setFixedHeight(25)
self.selectInvertPushButton = PM_PushButton(pmGroupBox,
text="Invert",
setAsDefault=True)
self.selectInvertPushButton.setFixedHeight(25)
buttonList = [('PM_PushButton', self.selectAllPushButton, 0, 0),
('PM_PushButton', self.selectNonePushButton, 1, 0),
('PM_PushButton', self.selectInvertPushButton, 2, 0)]
self.buttonGrid = PM_WidgetGrid(pmGroupBox, widgetList=buttonList)
self.sequenceTable = PM_TableWidget(pmGroupBox)
#self.sequenceTable.setModel(self.tableModel)
self.sequenceTable.resizeColumnsToContents()
self.sequenceTable.verticalHeader().setVisible(False)
#self.sequenceTable.setRowCount(0)
self.sequenceTable.setColumnCount(5)
self.checkbox = QCheckBox()
self.sequenceTable.setFixedHeight(345)
self.sequenceTable.setGridStyle(Qt.NoPen)
self.sequenceTable.setHorizontalHeaderLabels(self.headerdata_seq)
###self._fillSequenceTable()
self.showSequencePushButton = PM_PushButton(pmGroupBox,
text="Show Sequence",
setAsDefault=True,
spanWidth=True)
def __init__(self,
parentWidget,
title = '',
labelList = [],
alignment = None,
isBold = False
):
"""
Appends a PM_LabelGrid widget ( a groupbox) to the bottom of I{parentWidget},
the Property Manager Group box.
@param parentWidget: The parent group box containing this widget.
@type parentWidget: PM_GroupBox
@param title: The group box title.
@type title: str
@param labelList: A list of I{label info lists}. There is one label
info list for each label in the grid. The label
info list contains the following items:
1. Widget Type - in this case its 'Label'(str),
2. Label text (str),
3. Column (int),
4. Row (int).
@type labelList: list
"""
self.isBold = isBold
#Empty list that will contain all the labels in this widget.
self.labels = []
PM_WidgetGrid.__init__(self,
parentWidget ,
title,
labelList,
alignment)
def __init__(self,
parentWidget,
title='',
buttonList=[],
alignment=None,
label='',
labelColumn=0,
spanWidth=True,
checkedId=-1,
setAsDefault=False,
isAutoRaise=False,
isCheckable=True):
"""
Appends a PM_ToolButtonGrid widget to the bottom of I{parentWidget},
the Property Manager Group box.
@param parentWidget: The parent group box containing this widget.
@type parentWidget: PM_GroupBox
@param title: The group box title.
@type title: str
@param buttonList: A list of I{button info lists}. There is one button
info list for each button in the grid. The button
info list contains the following items:
1. Button Type - in this case its 'ToolButton'(str),
2. Button Id (int),
3. Button text (str),
4. Button icon path (str),
5. Button tool tip (str),
6. Column (int),
7. Row (int).
@type buttonList: list
@param alignment: The alignment of the toolbutton row in the parent
groupbox. Based on its value,spacer items is added
to the grid layout of the parent groupbox.
@type alignment: str
@param label: The label for the toolbutton row. If present, it is
added to the same grid layout as the rest of the
toolbuttons, in column number E{0}.
@type label: str
@param labelColumn: The column in the parentWidget's grid layout to which
this widget's label will be added. The labelColum
can only be E{0} or E{1}
@type labelColumn: int
@param spanWidth: If True, the widget and its label will span the width
of the group box. Its label will appear directly above
the widget (unless the label is empty) and is left justified.
@type spanWidth: bool (default False)
@param checkedId: Checked button id in the button group. Default value
is -1 that implies no button is checked.
@type checkedId: int
@param setAsDefault: If True, sets the I{checkedId} specified by the
user as the default checked
@type setAsDefault: boolean
"""
self.buttonGroup = QButtonGroup()
self.buttonGroup.setExclusive(True)
self.isAutoRaise = isAutoRaise
self.isCheckable = isCheckable
self.buttonsById = {}
self.buttonsByText = {}
if setAsDefault:
self.setDefaultCheckedId(checkedId)
PM_WidgetGrid.__init__(self, parentWidget, title, buttonList,
alignment, label, labelColumn, spanWidth)
def _loadGroupBox1(self, pmGroupBox):
"""
Load widgets in the first group box.
"""
self.headerdata_desc = ['Name', 'Descriptor']
self.set_names = ["Any", "Same", "Locked", "Apolar", "Polar"]
self.rosetta_set_names = ["ALLAA", "NATAA", "NATRO", "APOLA", "POLAR"]
self.descriptor_list = [
"PGAVILMFWYCSTNQDEHKR", "____________________",
"____________________", "PGAVILMFWYC_________",
"___________STNQDEHKR"
]
self.applyAnyPushButton = PM_PushButton(pmGroupBox,
text="ALLAA",
setAsDefault=True)
self.applySamePushButton = PM_PushButton(pmGroupBox,
text="NATAA",
setAsDefault=True)
self.applyLockedPushButton = PM_PushButton(pmGroupBox,
text="NATRO",
setAsDefault=True)
self.applyPolarPushButton = PM_PushButton(pmGroupBox,
text="APOLA",
setAsDefault=True)
self.applyApolarPushButton = PM_PushButton(pmGroupBox,
text="POLAR",
setAsDefault=True)
#self.applyBackrubPushButton = PM_PushButton( pmGroupBox,
# text = "BACKRUB",
# setAsDefault = True)
self.applyAnyPushButton.setFixedHeight(25)
self.applyAnyPushButton.setFixedWidth(60)
self.applySamePushButton.setFixedHeight(25)
self.applySamePushButton.setFixedWidth(60)
self.applyLockedPushButton.setFixedHeight(25)
self.applyLockedPushButton.setFixedWidth(60)
self.applyPolarPushButton.setFixedHeight(25)
self.applyPolarPushButton.setFixedWidth(60)
self.applyApolarPushButton.setFixedHeight(25)
self.applyApolarPushButton.setFixedWidth(60)
applyButtonList = [('PM_PushButton', self.applyAnyPushButton, 0, 0),
('PM_PushButton', self.applySamePushButton, 1, 0),
('PM_PushButton', self.applyLockedPushButton, 2, 0),
('PM_PushButton', self.applyPolarPushButton, 3, 0),
('PM_PushButton', self.applyApolarPushButton, 4, 0)]
self.applyButtonGrid = PM_WidgetGrid(pmGroupBox,
label="Apply standard set",
widgetList=applyButtonList)
self.descriptorsTable = PM_TableWidget(pmGroupBox,
label="Custom descriptors")
self.descriptorsTable.setFixedHeight(100)
self.descriptorsTable.setRowCount(0)
self.descriptorsTable.setColumnCount(2)
self.descriptorsTable.verticalHeader().setVisible(False)
self.descriptorsTable.horizontalHeader().setVisible(True)
self.descriptorsTable.setGridStyle(Qt.NoPen)
self.descriptorsTable.setHorizontalHeaderLabels(self.headerdata_desc)
self._updateSetLists()
self._fillDescriptorsTable()
self.descriptorsTable.resizeColumnsToContents()
self.newDescriptorPushButton = PM_PushButton(pmGroupBox,
text="New",
setAsDefault=True)
self.newDescriptorPushButton.setFixedHeight(25)
self.removeDescriptorPushButton = PM_PushButton(pmGroupBox,
text="Remove",
setAsDefault=True)
self.removeDescriptorPushButton.setFixedHeight(25)
self.applyDescriptorPushButton = PM_PushButton(pmGroupBox,
text="Apply",
setAsDefault=True)
self.applyDescriptorPushButton.setFixedHeight(25)
addDescriptorButtonList = [
('PM_PushButton', self.newDescriptorPushButton, 0, 0),
('PM_PushButton', self.removeDescriptorPushButton, 1, 0),
('PM_PushButton', self.applyDescriptorPushButton, 2, 0)
]
self.addDescriptorGrid = PM_WidgetGrid(
pmGroupBox, alignment="Center", widgetList=addDescriptorButtonList)
def __init__(self,
parentWidget,
title = '',
buttonList = [],
alignment = None,
label = '',
labelColumn = 0,
spanWidth = True,
checkedId = -1,
setAsDefault = False,
isAutoRaise = False,
isCheckable = True
):
"""
Appends a PM_ToolButtonGrid widget to the bottom of I{parentWidget},
the Property Manager Group box.
@param parentWidget: The parent group box containing this widget.
@type parentWidget: PM_GroupBox
@param title: The group box title.
@type title: str
@param buttonList: A list of I{button info lists}. There is one button
info list for each button in the grid. The button
info list contains the following items:
1. Button Type - in this case its 'ToolButton'(str),
2. Button Id (int),
3. Button text (str),
4. Button icon path (str),
5. Button tool tip (str),
6. Column (int),
7. Row (int).
@type buttonList: list
@param alignment: The alignment of the toolbutton row in the parent
groupbox. Based on its value,spacer items is added
to the grid layout of the parent groupbox.
@type alignment: str
@param label: The label for the toolbutton row. If present, it is
added to the same grid layout as the rest of the
toolbuttons, in column number E{0}.
@type label: str
@param labelColumn: The column in the parentWidget's grid layout to which
this widget's label will be added. The labelColum
can only be E{0} or E{1}
@type labelColumn: int
@param spanWidth: If True, the widget and its label will span the width
of the group box. Its label will appear directly above
the widget (unless the label is empty) and is left justified.
@type spanWidth: bool (default False)
@param checkedId: Checked button id in the button group. Default value
is -1 that implies no button is checked.
@type checkedId: int
@param setAsDefault: If True, sets the I{checkedId} specified by the
user as the default checked
@type setAsDefault: boolean
"""
self.buttonGroup = QButtonGroup()
self.buttonGroup.setExclusive(True)
self.isAutoRaise = isAutoRaise
self.isCheckable = isCheckable
self.buttonsById = {}
self.buttonsByText = {}
if setAsDefault:
self.setDefaultCheckedId(checkedId)
PM_WidgetGrid.__init__(self,
parentWidget ,
title,
buttonList,
alignment,
label,
labelColumn,
spanWidth
)
def _loadGroupBox1(self, pmGroupBox):
"""
Load widgets in group box.
"""
self.labelfont = QFont("Helvetica", 12)
self.descriptorfont = QFont("Courier New", 12)
self.headerdata = ['', 'ID', 'Set', 'Descriptor']
self.set_names = ["Any", "Same", "Locked", "Polar", "Apolar"]
self.rosetta_set_names = ["ALLAA", "NATRO", "NATAA", "POLAR", "APOLA"]
self.descriptor_list = [
"GAVILMFWCSTYNQDEHKRP", "____________________",
"____________________", "________CSTYNQDEHKR_",
"GAVILMFW___________P"
]
self.descriptorsTable = PM_TableWidget(pmGroupBox)
self.descriptorsTable.setFixedHeight(100)
self.descriptorsTable.setRowCount(len(self.set_names))
self.descriptorsTable.setColumnCount(2)
self.descriptorsTable.verticalHeader().setVisible(False)
self.descriptorsTable.horizontalHeader().setVisible(False)
for index in range(len(self.set_names)):
item_widget = QTableWidgetItem(self.set_names[index])
item_widget.setFont(self.labelfont)
item_widget.setFlags(Qt.ItemIsSelectable | Qt.ItemIsEnabled
| Qt.ItemIsEditable)
item_widget.setTextAlignment(Qt.AlignCenter)
self.descriptorsTable.setItem(index, 0, item_widget)
item_widget = QTableWidgetItem(self.descriptor_list[index])
item_widget.setFont(self.descriptorfont)
item_widget.setFlags(Qt.ItemIsSelectable | Qt.ItemIsEnabled
| Qt.ItemIsEditable)
item_widget.setTextAlignment(Qt.AlignCenter)
self.descriptorsTable.setItem(index, 1, item_widget)
self.descriptorsTable.setRowHeight(index, 16)
pass
self.descriptorsTable.resizeColumnsToContents()
self.applyDescriptorPushButton = PM_PushButton(pmGroupBox,
text="Apply",
setAsDefault=True)
self.selectAllPushButton = PM_PushButton(pmGroupBox,
text="All",
setAsDefault=True)
self.selectNonePushButton = PM_PushButton(pmGroupBox,
text="None",
setAsDefault=True)
self.selectInvertPushButton = PM_PushButton(pmGroupBox,
text="Invert",
setAsDefault=True)
self.win.connect(self.applyDescriptorPushButton, SIGNAL("clicked()"),
self._applyDescriptor)
self.win.connect(self.selectAllPushButton, SIGNAL("clicked()"),
self._selectAll)
self.win.connect(self.selectNonePushButton, SIGNAL("clicked()"),
self._selectNone)
self.win.connect(self.selectInvertPushButton, SIGNAL("clicked()"),
self._invertSelection)
buttonList = [('PM_PushButton', self.applyDescriptorPushButton, 0, 0),
('QSpacerItem', 5, 5, 1, 0),
('PM_PushButton', self.selectAllPushButton, 2, 0),
('PM_PushButton', self.selectNonePushButton, 3, 0),
('PM_PushButton', self.selectInvertPushButton, 4, 0)]
self.buttonGrid = PM_WidgetGrid(pmGroupBox, widgetList=buttonList)
self.recenterViewCheckBox = \
PM_CheckBox( pmGroupBox,
text = "Re-center view",
setAsDefault = True,
state = Qt.Checked)
self.sequenceTable = PM_TableWidget(pmGroupBox)
#self.sequenceTable.setModel(self.tableModel)
self.sequenceTable.resizeColumnsToContents()
self.sequenceTable.verticalHeader().setVisible(False)
#self.sequenceTable.setRowCount(0)
self.sequenceTable.setColumnCount(4)
self.checkbox = QCheckBox()
self.sequenceTable.setFixedHeight(345)
self.sequenceTable.setHorizontalHeaderLabels(self.headerdata)