Exemplo n.º 1
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 def getRepMap(self, alignment=None):
     result = super(GenericValidationData, self).getRepMap(alignment)
     outputfile = os.path.expandvars(
         replaceByMap(
             "%s_%s_.oO[name]Oo..root" % (self.outputBaseName, self.name),
             result))
     resultfile = os.path.expandvars(
         replaceByMap(
             ("/store/caf/user/$USER/.oO[eosdir]Oo./" +
              "%s_%s_.oO[name]Oo..root" % (self.resultBaseName, self.name)),
             result))
     result.update({
         "resultFile": ".oO[resultFiles[.oO[nIndex]Oo.]]Oo.",
         "resultFiles": addIndex(resultfile, self.NJobs),
         "finalResultFile": resultfile,
         "outputFile": ".oO[outputFiles[.oO[nIndex]Oo.]]Oo.",
         "outputFiles": addIndex(outputfile, self.NJobs),
         "finalOutputFile": outputfile,
         "ProcessName": self.ProcessName,
         "Bookkeeping": self.Bookkeeping,
         "LoadBasicModules": self.LoadBasicModules,
         "TrackSelectionRefitting": self.TrackSelectionRefitting,
         "ValidationConfig": self.ValidationTemplate,
         "FileOutputTemplate": self.FileOutputTemplate,
         "DefinePath": self.DefinePath,
     })
     return result
Exemplo n.º 2
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 def createScript(self, fileContents, path, downloadFiles=[], repMap = None, repMaps = None):
     self.scriptFiles = GenericValidation.createFiles(self, fileContents,
                                                      path, repMap = repMap, repMaps = repMaps)
     for script in self.scriptFiles:
         for scriptwithindex in addIndex(script, self.NJobs):
             os.chmod(scriptwithindex,0755)
     return self.scriptFiles
Exemplo n.º 3
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 def createScript(self, fileContents, path, downloadFiles=[], repMap = None, repMaps = None):
     self.scriptFiles = self.createFiles(fileContents,
                                         path, repMap = repMap, repMaps = repMaps)
     for script in self.scriptFiles:
         for scriptwithindex in addIndex(script, self.NJobs):
             os.chmod(scriptwithindex,0o755)
     return self.scriptFiles
Exemplo n.º 4
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 def getRepMap(self, alignment = None):
     result = GenericValidation.getRepMap(self, alignment)
     outputfile = os.path.expandvars(replaceByMap(
                        "%s_%s_.oO[name]Oo..root" % (self.outputBaseName, self.name)
                              , result))
     resultfile = os.path.expandvars(replaceByMap(("/store/caf/user/$USER/.oO[eosdir]Oo./" +
                        "%s_%s_.oO[name]Oo..root" % (self.resultBaseName, self.name))
                              , result))
     result.update({
             "resultFile": ".oO[resultFiles[.oO[nIndex]Oo.]]Oo.",
             "resultFiles": addIndex(resultfile, self.NJobs),
             "finalResultFile": resultfile,
             "outputFile": ".oO[outputFiles[.oO[nIndex]Oo.]]Oo.",
             "outputFiles": addIndex(outputfile, self.NJobs),
             "finalOutputFile": outputfile
             })
     return result
Exemplo n.º 5
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 def getRepMap(self, alignment = None):
     result = GenericValidation.getRepMap(self, alignment)
     outputfile = os.path.expandvars(replaceByMap(
                        "%s_%s_.oO[name]Oo..root" % (self.outputBaseName, self.name)
                              , result))
     resultfile = os.path.expandvars(replaceByMap(("/store/caf/user/$USER/.oO[eosdir]Oo./" +
                        "%s_%s_.oO[name]Oo..root" % (self.resultBaseName, self.name))
                              , result))
     result.update({
             "resultFile": ".oO[resultFiles[.oO[nIndex]Oo.]]Oo.",
             "resultFiles": addIndex(resultfile, self.NJobs),
             "finalResultFile": resultfile,
             "outputFile": ".oO[outputFiles[.oO[nIndex]Oo.]]Oo.",
             "outputFiles": addIndex(outputfile, self.NJobs),
             "finalOutputFile": outputfile
             })
     return result
Exemplo n.º 6
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 def createScript(self, path, template = configTemplates.scriptTemplate, downloadFiles=[], repMap = None, repMaps = None):
     scriptName = "%s.%s.%s.sh"%(self.scriptBaseName, self.name,
                                 self.alignmentToValidate.name )
     if repMap is None and repMaps is None:
         repMap = self.getRepMap()
         repMap["CommandLine"]=""
         for cfg in self.configFiles:
             repMap["CommandLine"]+= repMap["CommandLineTemplate"]%{"cfgFile":addIndex(cfg, self.NJobs, ".oO[nIndex]Oo."),
                                                   "postProcess":""
                                                  }
     scripts = {scriptName: template}
     return super(GenericValidationData, self).createScript(scripts, path, downloadFiles = downloadFiles,
                                                            repMap = repMap, repMaps = repMaps)
Exemplo n.º 7
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 def createScript(self, path, template = configTemplates.scriptTemplate, downloadFiles=[], repMap = None, repMaps = None):
     scriptName = "%s.%s.%s.sh"%(self.scriptBaseName, self.name,
                                 self.alignmentToValidate.name )
     if repMap is None and repMaps is None:
         repMap = self.getRepMap()
         repMap["CommandLine"]=""
         for cfg in self.configFiles:
             repMap["CommandLine"]+= repMap["CommandLineTemplate"]%{"cfgFile":addIndex(cfg, self.NJobs, ".oO[nIndex]Oo."),
                                                   "postProcess":""
                                                  }
     scripts = {scriptName: template}
     return GenericValidation.createScript(self, scripts, path, downloadFiles = downloadFiles,
                                           repMap = repMap, repMaps = repMaps)
Exemplo n.º 8
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 def getRepMap(self, alignment = None):
     result = super(GenericValidationData, self).getRepMap(alignment)
     outputfile = os.path.expandvars(replaceByMap(
                        "%s_%s_.oO[name]Oo..root" % (self.outputBaseName, self.name)
                              , result))
     resultfile = os.path.expandvars(replaceByMap(("/store/caf/user/$USER/.oO[eosdir]Oo./" +
                        "%s_%s_.oO[name]Oo..root" % (self.resultBaseName, self.name))
                              , result))
     result.update({
             "resultFile": ".oO[resultFiles[.oO[nIndex]Oo.]]Oo.",
             "resultFiles": addIndex(resultfile, self.NJobs),
             "finalResultFile": resultfile,
             "outputFile": ".oO[outputFiles[.oO[nIndex]Oo.]]Oo.",
             "outputFiles": addIndex(outputfile, self.NJobs),
             "finalOutputFile": outputfile,
             "ProcessName": self.ProcessName,
             "Bookkeeping": self.Bookkeeping,
             "LoadBasicModules": self.LoadBasicModules,
             "TrackSelectionRefitting": self.TrackSelectionRefitting,
             "ValidationConfig": self.ValidationTemplate,
             "FileOutputTemplate": self.FileOutputTemplate,
             "DefinePath": self.DefinePath,
             })
     return result
Exemplo n.º 9
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    def createFiles(self, fileContents, path, repMap = None, repMaps = None):
        """repMap: single map for all files
           repMaps: a dict, with the filenames as the keys"""
        if repMap is not None and repMaps is not None:
            raise AllInOneError("createFiles can only take repMap or repMaps (or neither), not both")
        result = []
        for fileName in fileContents:
            filePath = os.path.join(path, fileName)
            result.append(filePath)

            for (i, filePathi) in enumerate(addIndex(filePath, self.NJobs)):
                theFile = open( filePathi, "w" )
                fileContentsi = fileContents[ fileName ]
                if repMaps is not None:
                    repMap = repMaps[fileName]
                if repMap is not None:
                    repMap.update({"nIndex": str(i)})
                    fileContentsi = replaceByMap(fileContentsi, repMap)
                theFile.write( fileContentsi )
                theFile.close()

        return result
Exemplo n.º 10
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    def createFiles(self, fileContents, path, repMap = None, repMaps = None):
        """repMap: single map for all files
           repMaps: a dict, with the filenames as the keys"""
        if repMap is not None and repMaps is not None:
            raise AllInOneError("createFiles can only take repMap or repMaps (or neither), not both")
        result = []
        for fileName in fileContents:
            filePath = os.path.join(path, fileName)
            result.append(filePath)

            for (i, filePathi) in enumerate(addIndex(filePath, self.NJobs)):
                theFile = open( filePathi, "w" )
                fileContentsi = fileContents[ fileName ]
                if repMaps is not None:
                    repMap = repMaps[fileName]
                if repMap is not None:
                    repMap.update({"nIndex": str(i)})
                    fileContentsi = replaceByMap(fileContentsi, repMap)
                theFile.write( fileContentsi )
                theFile.close()

        return result