def parse_gui_options(fname, plate_copies, replicates_per_plate):
SYSTEM_CAPACITY= 5 - plate_copies
print("hi")
print(fname)
print("plate copties " + str(plate_copies) + " replicates per plate" + str(replicates_per_plate))
data_list, keys = load_csv_array(fname)
#return a sorted list based on barcode
newlist = sorted(data_list, key=lambda k: k['BARCODE'])
dest_list, dest_keys = load_csv_array(destination_well_filename)
dest_lit_length = len(dest_list) - 1
print(dest_lit_length)
dest_list_counter = 0
dplatecounter = 1
plate_capacity_checker = 0
check_barcode = newlist[0]['BARCODE']
Transfer_volume = 25
for i in newlist:
current_barcode = (str(i['BARCODE']))
if check_barcode == current_barcode:
continue
else:
plate_capacity_checker = plate_capacity_checker + 1
check_barcode = current_barcode
if plate_capacity_checker == SYSTEM_CAPACITY:
print("too much")
for y in range(0, replicates_per_plate):
print(str(i) + " " + str(dest_list[dest_list_counter]['Well ID']) + " " + "DP" + str(dplatecounter))
dict_holder = {"Sample Name": i["FORMATTED_BATCH_ID"], "Source_Plate_Barcode": i["BARCODE"], "SOURCE_WELL_REF": i["WELL_REF"], "DESTINATION_WELL_REF": str(dest_list[dest_list_counter]['Well ID']), "Destnation_Plate_Barcode": "DP" + str(dplatecounter), "Transfer_Volume": Transfer_volume}
print(dict_holder)
print(dest_list_counter)
print()
dest_list_counter = dest_list_counter + 1
print(str(dest_list_counter)+ " "+str(dest_lit_length))
if dest_list_counter > dest_lit_length:
print("ever in if")
dest_list_counter = 0
dplatecounter = dplatecounter + 1
print("finished")
def open_file_forcherry(fpath):
load_csv_array(fpath)
data_list, keys = load_csv_array("picklist.csv")
print(data_list)