GitHub - bh0085/compbio: Comp Bio Stuff at MIT

Branches Tags

Name		Name	Last commit message	Last commit date
Latest commit History 667 Commits
5s		5s
biopython		biopython
broad		broad
config		config
external		external
fun		fun
help		help
learning		learning
network		network
old/mpl		old/mpl
people		people
phylo		phylo
projects		projects
rna		rna
saved		saved
scripts		scripts
tests		tests
utils		utils
zhang		zhang
.DS_Store		.DS_Store
.emacs		.emacs
.gitignore		.gitignore
NOTES		NOTES
README		README
__init__.py		__init__.py
cb		cb
p		p

Repository files navigation

For the newest networks, check /network/patrick/[___].txt

I am not sure which is better, they share at least 60% of edges.

A utility to view TF/TG expression levels is in /network/step_predict.py.

New utilities to parse the new network are in /network/netutils2.py