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SMART TEST DATA GENERATOR This generator uses the data files in the 'data' directory to generate SMArt RDF test data. The files in the data directory are tab-delimited tables that can be edited and extended with new data as needed. All the python scripts are in the 'bin' directory, and should be run from that directory. (The python code requires python 2.6 with argparse and rdflib added via easy_install (on OSX 10.6); or just rdflib added on Ubuntu 10.10.) The main script for general use is generate.py, the other files in 'bin' are basically modules supporting generate.py. The file 'testdata.py' contains most of the constant declarations and utility functions that drive the system configuration. The file 'generate.py' contains all the RDF formatting code. From the 'bin' directory, run: python generate.py --help To get a general help message. The RC4 test data files in the 'test-data' directory were generated by: python generate.py --write ../test-data And the 'summary.txt' file was added to 'test-data' by running: python generate.py --summary > ../test-data/summary.txt A good way to look at a single patient, with patient ID, PID, is: python generate.py --summary PID Or to view the RDF for a given patient: python generate.py --rdf PID | less
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Utilities to generate sample data as SMArt RDF
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