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PyMSTk

Python Model Selection Toolkit (spelled PyMiSTake)

A small Python toolkit for the estimation of global likelihoods (Bayesian evidence).

Currently implemented routines

  • Bridge sampling with a proxy distribution
    • Estimates the absolute global likelihood given
      • a set of posterior sample locations
      • a set of posterior samples corresponding to the locations
      • posterior distribution function
      • proxy distribution (optional)

Routines to be implemented

  • Nested sampling
  • Truncated posterior mixture estimate

Trivial routines that may be implemeted

  • Basic MC integration
  • Importance sampling MC integration

Nontrivial routines that may (or may not) be implemented

  • Bayesian quadrature

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