This project contains several tools to play with fiber data in: MRI Studio format.

The mrcap subdirectory contains the source code that generates graphs from dMRI streamlines. It produces two varieties of output:

• smallgraphs: these use brain atlas regions of interest (70) to make 70x70 adjacency matrix graphs.
• biggraphs: these create connectivities among greymatter voxels and make .

All graphs are igraph graphs that are written to disk in graphml format.

The cmapper directory contains simple tools to manipulate connectome mapper outputs.

The MROCPdjango directory contains code developed for hosted Web-services for building brain-graphs and computing invariants. More info on Web-services can be obtained directly from openconnecto.me/graph-services.

See our project web page . This is part of the bigger Johns Hopkins University Open Connectome project found here.