GitHub - jeremyt19115678/Protein-2D-Structure-Prediction: Code from an internship at National Yang-Ming University under the instruction of Professor Sheh-Yi Sheu and Ph. D candidate Yu-Cheng Liu. Takes data of protein primary structure and related physicochemical properties to train SVM, which is then used to predict the protein's secondary structure.

jeremyt19115678 / Protein-2D-Structure-Prediction Public

Code from an internship at National Yang-Ming University under the instruction of Professor Sheh-Yi Sheu and Ph. D candidate Yu-Cheng Liu. Takes data of protein primary structure and related physicochemical properties to train SVM, which is then used to predict the protein's secondary structure.

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Name		Name	Last commit message	Last commit date
Latest commit History 1 Commits
Complicated_Math.py		Complicated_Math.py
Data_Principal_Component_Analyzer.py		Data_Principal_Component_Analyzer.py
Data_Principal_Component_Analyzer.pyc		Data_Principal_Component_Analyzer.pyc
Given_Factor_Loading_Matrix.txt		Given_Factor_Loading_Matrix.txt
Numerical_Training_Set_Creator.py		Numerical_Training_Set_Creator.py
Physicochemical_Properties_Amino_Acids.txt		Physicochemical_Properties_Amino_Acids.txt
Prediction.py		Prediction.py
Runner.py		Runner.py
SVM.py		SVM.py
Secondary_Structure_Conversion_Verifier_v2.py		Secondary_Structure_Conversion_Verifier_v2.py
Secondary_Structure_Converter_v2.py		Secondary_Structure_Converter_v2.py
Tendency_Factor_Calculator.py		Tendency_Factor_Calculator.py
Training_Data_Extraction_Verifier.py		Training_Data_Extraction_Verifier.py
Training_Data_Extractor.py		Training_Data_Extractor.py
Training_Data_Purification_Verifier.py		Training_Data_Purification_Verifier.py
Training_Data_Purifier.py		Training_Data_Purifier.py
Verifier.py		Verifier.py
cullpdb_pc30_res2.0_R0.25_d180607_chains11093.txt		cullpdb_pc30_res2.0_R0.25_d180607_chains11093.txt