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validate_allstations.py
executable file
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validate_allstations.py
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#!/usr/bin/env python
# ./validate 201409
import scipy as sp
import numpy as np
import numpy.ma as ma
import matplotlib
matplotlib.use('Agg')
import pylab as pl
from netCDF4 import Dataset, MFDataset, MFTime, date2num, num2date
import dataanalysis as da
import os
import datetime as dt
import validationtools as vt
from stationlist import locations as locations
from stationlist import WMsensors, bestWMsensor
import sys
#import calendar
print("The Python version is %s.%s.%s" % sys.version_info[:3])
interactive=True
if interactive:
timep='201610'
#timep='2013-2014'
else:
if len(sys.argv) > 1:
timep = sys.argv[1]
else:
now = dt.datetime.now()
#timep = str(now.year)+str(now.month)
timep = now.strftime('%Y%m')
if len(timep)==6:
month = timep[4:6]
year = timep[0:4]
timestr = month+'-'+year
t1 = dt.datetime(int(year), int(month), 1)
if int(month) < 12:
t2 = dt.datetime(int(year), int(month)+1, 1)
else:
t2 = dt.datetime(int(year)+1, 1, 1)
else:
t1 = dt.datetime(int(year), 1, 1)
t2 = dt.datetime(int(year)+1, 1, 1)
timestr=timep
print('time: '+timestr)
print(t1, t2)
# plotpath
#ppath = '/vol/hindcast3/waveverification/'+timep+'/'
ppath = '/lustre/storeA/project/fou/hi/waveverification/'+timep+'/'
# set color table for models
ct = {'Subjective': 'b', 'WAM10': 'c', 'WAM4':'m', 'ECWAM':'k', 'LAWAM':'0.25', 'AROME': 'b', 'HIRLAM8': 'y', 'MWAM4':'r', 'EXP':'y', 'MWAM4exp':'w', 'MWAM10':'w', 'MWAM8':'g'}
def select_var_from_models(G,varname):
modeldata={}
for j, gname in enumerate(G.keys()):
if gname=='OBS_d22':
continue
try:
var = G[gname].variables[varname][:]
var[var.mask==True]=sp.nan
# check if we are dealing with directions and ensure meteorological convention
if (G[gname].variables[varname].units[0:6] == 'degree'):
try:
if (G[gname].variables[varname].Convention=='oceanographic'):
var=var+180
var[var>360.]=var[var>360.]-360.
except AttributeError:
var=var
except KeyError:
continue
if sp.isnan(var[0]).all():
continue
modeldata.update({gname: var})
return modeldata
from matplotlib import dates
minorLocator=dates.DayLocator(range(33))
majorLocator=dates.DayLocator(range(5,31,5))
fmt=dates.DateFormatter('%d.%m.%Y')
varname = 'Hs'
obs_all = []
mod_all = {'ECWAM':[], 'MWAM4':[], 'MWAM8':[], 'EXP':[]}
for station, parameters in locations.iteritems():
print ' '
print 'read data for station '+station+' for '+timep
#
# open file
path = '/lustre/storeA/project/fou/hi/waveverification/data'
filename = station+'_'+timep+'.nc'
nc = Dataset(os.path.join(path,filename),mode='r')
time = num2date(nc.variables['time'][:],nc.variables['time'].units)
G = nc.groups
OBS = G['OBS_d22']
os.system('mkdir -p '+ppath+varname)
# Specify which WM sensor to use for validation
try:
sensor = bestWMsensor[station]
except KeyError:
sensor = 0
obs = ma.array(OBS.variables[varname][sensor])
obs.data[obs.mask==True] = sp.nan # make sure all masked values are nan
obs.mask = sp.logical_or(obs.mask, sp.isnan(obs.data))
units = OBS.variables[varname].units
if (all(sp.isnan(obs.data)) or all(obs.mask==True)):
print 'no data for '+station+' during '+timestr
continue
# select variable from each model:
modeldata = select_var_from_models(G,varname)
#
# append to list for all stations:
obs_all.append(obs)
for gname, var in modeldata.iteritems():
if gname in mod_all.keys():
print('append ' +gname+ ' for ' + station)
mod_all[gname].append(var)
#nc.close()
# make arrays from list
obs = sp.array(obs_all)
modeldata = {}
for gname in mod_all.keys():
modeldata[gname] = sp.array(mod_all[gname])
#
# make scatter and qq plot
#
fig=pl.figure(figsize=[10,5])
ax1=fig.add_subplot(121)
ax2=fig.add_subplot(122)
for gname, var in modeldata.iteritems():
vt.scqqplot(obs, var[:,0,:],color=ct[gname], label=gname, ax1=ax1, ax2=ax2)# , prob=sp.arange(0.001,0.999,0.001))
ax1.legend(loc='lower right',fontsize='small')
ax1.set_title('all stations '+varname+' ['+units+']'+' '+timestr)
pfilename = 'allstations_'+varname+'_scatterqq.png'
fig.tight_layout(pad=0.4)
fig.savefig(os.path.join(ppath+varname,pfilename))
#
# plot statistics as function of forcast time
#
fig = pl.figure(figsize=[10,8])
ax1 = fig.add_subplot(411)
ax2 = fig.add_subplot(412)
ax3 = fig.add_subplot(413)
ax4 = fig.add_subplot(414)
ax1.set_title('allstations '+varname+' forecast skill'+' '+timestr)
for gname, var in modeldata.iteritems():
vart = np.transpose(var,axes=[1,0,2])
vt.forecastskillplot(obs, vart, G[gname].getncattr('reinitialization_step'), vt.amerr, color=ct[gname], label=gname, ax=ax1)
vt.forecastskillplot(obs, vart, G[gname].getncattr('reinitialization_step'), vt.rmse, color=ct[gname], label=gname, ax=ax2)
vt.forecastskillplot(-obs, -vart, G[gname].getncattr('reinitialization_step'), vt.bias, color=ct[gname], label=gname, ax=ax3)
vt.forecastskillplot(obs, vart, G[gname].getncattr('reinitialization_step'), vt.pearsonr, color=ct[gname], label=gname, ax=ax4)
ax1.legend(loc='lower right',fontsize='small')
ax1.set_ylabel('MAE ['+units+']')
ax2.set_ylabel('RMSE ['+units+']')
ax3.set_ylabel('model bias ['+units+']')
ax4.set_ylabel('cor. coef.')
ax4.set_xlabel('model lead time [h]')
fig.tight_layout(pad=0.2)
pfilename = 'allstations_'+varname+'_forecastskill.png'
fig.savefig(os.path.join(ppath+varname,pfilename))
if interactive:
pl.show()
#
# compute statistics
#