GitHub - juliambrosman/nvp_pacbio_assembly_comparison: Assembling a subset of nahant vibriophages using pacbio data and comparing it to assemblies created only with illumina data.

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Assembling a subset of nahant vibriophages using pacbio data and comparing it to assemblies created only with illumina data.

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Name		Name	Last commit message	Last commit date
Latest commit History 5 Commits
scripts		scripts
Functions.ipynb		Functions.ipynb
PB_Notebook1.ipynb		PB_Notebook1.ipynb
PB_Notebook2.ipynb		PB_Notebook2.ipynb
PB_Notebook3.ipynb		PB_Notebook3.ipynb
PB_Notebook4.ipynb		PB_Notebook4.ipynb
PB_Notebook5_ReadCoverage.ipynb		PB_Notebook5_ReadCoverage.ipynb
README.txt		README.txt

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## Processing of PacBio Data for the Nahant Vibriophage Collection

* Notebook1 examines read details and initial assembly of data and 
comparison to previously assembled contigs.

* Notebook2 separates out reads based on best matching contig

* ./scripts/ are python scripts run on server to process data