GitHub - tfording/marmorata_linkagemap: Marmorata Linkage Map

Name		Name	Last commit message	Last commit date
Latest commit History 2 Commits
BUSCO_plot.py		BUSCO_plot.py
CoverageFileFilter.py		CoverageFileFilter.py
LG_PLOT.py		LG_PLOT.py
Parentcall_vcf_match.py		Parentcall_vcf_match.py
__init__.py		__init__.py
add_LG_2_ped.py		add_LG_2_ped.py
cat_and_cut.py		cat_and_cut.py
check_file.py		check_file.py
chrom3_lg_plot.py		chrom3_lg_plot.py
clean_vcf.py		clean_vcf.py
compare_singlechromSEQ_toLGs.py		compare_singlechromSEQ_toLGs.py
cpl_2_scafLG_tbl.py		cpl_2_scafLG_tbl.py
dist_snps_scaff.py		dist_snps_scaff.py
filter_by_variant_coverage.py		filter_by_variant_coverage.py
filter_linkage_groups.py		filter_linkage_groups.py
haplotypeCallerHardFilter.py		haplotypeCallerHardFilter.py
loadCoverageTxtToDict.py		loadCoverageTxtToDict.py
male_female_LGdiff.py		male_female_LGdiff.py
parse_JoinIdenLG.py		parse_JoinIdenLG.py
plotLGbyPOS.py		plotLGbyPOS.py
plotLGbyPOS2.py		plotLGbyPOS2.py
plotLinkageGroupsPosition.py		plotLinkageGroupsPosition.py
reverse_list.py		reverse_list.py
scaffold_linkage_hist.py		scaffold_linkage_hist.py
scaffoldsByLinkageG.py		scaffoldsByLinkageG.py
scaflist.py		scaflist.py
strip_singles.py		strip_singles.py
strip_vcf_scaffolds_10kb.py		strip_vcf_scaffolds_10kb.py
vfc_to_makeped.py		vfc_to_makeped.py