def setUp(self): # Retreive owl file for NIDM-Results owl_file = os.path.join(NIDM_RESULTS_DIR, TERM_RESULTS_DIRNAME, 'nidm-results.owl') import_files = glob.glob( os.path.join(os.path.dirname(owl_file), os.pardir, os.pardir, "imports", '*.ttl')) TestResultDataModel.setUp(self, owl_file, import_files, test_files, TEST_DIR, NIDM_RESULTS_DIR)
def setUp(self): TestResultDataModel.setUp(self) self.ground_truth_dir = os.path.join(NIDM_RESULTS_DIR,'fsl', 'example001') self.fsl_export_ttl = os.path.join(TEST_FOLDER, 'FSL_example.ttl'); # RDF obtained by the FSL export self.fslexport = Graph() # self.fsl_export_ttl = os.path.join(self.test_dir, 'fsl', 'export', 'test01', 'fsl_nidm.ttl'); self.fslexport.parse(self.fsl_export_ttl, format='turtle') # Retreive owl file for NIDM-Results self.owl_file = os.path.join(TERM_RESULTS_DIR, 'nidm-results.owl')
def setUp(self): self.my_execption = "" # Display log messages in console logging.basicConfig( level=logging.DEBUG, format='%(asctime)s - %(levelname)s - %(message)s') # Retreive owl file for NIDM-Results owl_file = os.path.join(NIDM_RESULTS_DIR, 'terms', 'nidm-results.owl') # Retreive imported owl files from NIDM-Results owl_imports = glob.glob(os.path.join( os.path.dirname(owl_file), os.pardir, os.pardir, "imports", '*.ttl')) gt_dir = os.path.join(TEST_DIR, 'spmexport', 'ground_truth') TestResultDataModel.setUp(self, owl_file, owl_imports, test_files, TEST_DIR, gt_dir)
def setUp(self): self.my_execption = "" # Display log messages in console logging.basicConfig(level=logging.DEBUG, format='%(asctime)s - %(levelname)s - %(message)s') TestResultDataModel.setUp(self) self.ground_truth_dir = os.path.join(self.ground_truth_dir, 'spm', 'example001') # Current module directory is used as test directory self.test_dir = os.path.join(os.path.dirname(os.path.abspath(__file__)), 'spmexport', 'example001') # RDF obtained by the SPM export self.spmexport = Graph() # Turtle file obtained with SPM NI-DM export tool self.spm_export_ttl = os.path.join(self.test_dir, 'spm_nidm.ttl'); print "\n\nComparing: "+self.spm_export_ttl self.spmexport.parse(self.spm_export_ttl, format='turtle')
def setUp(self): self.my_execption = "" # Display log messages in console logging.basicConfig(level=logging.DEBUG, format='%(asctime)s - %(levelname)s - %(message)s') TestResultDataModel.setUp(self) self.ground_truth_dir = os.path.join(self.ground_truth_dir, 'spm', 'example001') # Current module directory is used as test directory self.test_dir = os.path.join( os.path.dirname(os.path.abspath(__file__)), 'spmexport', 'example001') # RDF obtained by the SPM export self.spmexport = Graph() # Turtle file obtained with SPM NI-DM export tool self.spm_export_ttl = os.path.join(self.test_dir, 'spm_nidm.ttl') print "\n\nComparing: " + self.spm_export_ttl self.spmexport.parse(self.spm_export_ttl, format='turtle')