Python _htseq_is_installed примеры использования

Пример #1

Файл: test_count.py Проект: Galithil/bcbio-nextgen

 def test_htseq_is_installed_in_resource(self):
     orig_path = os.environ['PATH']
     os.environ['PATH'] = ""
     faux_htseq_count = tempfile.NamedTemporaryFile()
     os.chmod(faux_htseq_count.name, stat.S_IEXEC)
     config = {"config": {"resources": {"htseq-count":
                                        {"cmd": faux_htseq_count.name}}}}
     is_installed = count._htseq_is_installed(config)
     os.environ['PATH'] = orig_path
     self.assertTrue(is_installed)

Пример #2

 def test_htseq_is_installed_in_resource(self):
     orig_path = os.environ['PATH']
     os.environ['PATH'] = ""
     faux_htseq_count = tempfile.NamedTemporaryFile()
     os.chmod(faux_htseq_count.name, stat.S_IEXEC)
     config = {"config": {"resources": {"htseq-count":
                                        {"cmd": faux_htseq_count.name}}}}
     is_installed = count._htseq_is_installed(config)
     os.environ['PATH'] = orig_path
     self.assertTrue(is_installed)

Пример #3

Файл: test_count.py Проект: Galithil/bcbio-nextgen

 def test_htseq_is_installed_in_path(self):
     self.assertTrue(count._htseq_is_installed({"config": {}}))

Пример #4

Файл: test_count.py Проект: yangjl/bcbio-nextgen

 def test_htseq_is_installed_in_path(self):
     self.assertTrue(count._htseq_is_installed({"config": {}}))