def import_shares():
admin = User.objects.get(username='******')
select = """SELECT
sp.description,
sp.random_dir,
sp.submitted,
p.description as pdescription,
p.project_title as ptitle,
g.db_group,
t.type as type,
t.description as type_description
FROM sub_project sp join project p on sp.project_id = p.project_id join type t on sp.type_id = t.type_id join db_group g on g.group_id = p.group_id"""
subprojects = dictfetchall(select)
for sp in subprojects:
share_id = '00000%s'%sp['random_dir']
try:
share = Share.objects.get(id=share_id)
share.delete()
except:
pass
share = Share(id=share_id)
share.name = ('%s: %s- %s, %s'%(sp['db_group'],sp['ptitle'],sp['type'],sp['submitted']))[:99]
print 'Creating %s'%share.name[:99]
share.notes = "Project Description:%s\nSubproject Description:%s"%(sp['pdescription'],sp['description'])
share.owner=admin
share.created = sp['submitted']
share.save()
tag = Tag.objects.get_or_create(name=sp['db_group'])[0]
share.tags.add(tag)
share.save()
def import_shares():
admin = User.objects.get(username='******')
select = """SELECT
sp.description,
sp.random_dir,
sp.submitted,
p.description as pdescription,
p.project_title as ptitle,
g.db_group,
t.type as type,
t.description as type_description
FROM sub_project sp join project p on sp.project_id = p.project_id join type t on sp.type_id = t.type_id join db_group g on g.group_id = p.group_id"""
subprojects = dictfetchall(select)
for sp in subprojects:
share_id = '00000%s' % sp['random_dir']
try:
share = Share.objects.get(id=share_id)
share.delete()
except:
pass
share = Share(id=share_id)
share.name = (
'%s: %s- %s, %s' %
(sp['db_group'], sp['ptitle'], sp['type'], sp['submitted']))[:99]
print 'Creating %s' % share.name[:99]
share.notes = "Project Description:%s\nSubproject Description:%s" % (
sp['pdescription'], sp['description'])
share.owner = admin
share.created = sp['submitted']
share.save()
tag = Tag.objects.get_or_create(name=sp['db_group'])[0]
share.tags.add(tag)
share.save()
def wrapped_f(*args, **kwargs):
from bioshareX.models import Share
share = kwargs.get(self.share_param, None)
if share:
if not isinstance(kwargs[self.share_param], Share):
try:
share = Share.get_by_slug_or_id(share)
except Share.DoesNotExist:
return render(
args[0],
'errors/message.html',
{'message': 'No share with that ID exists.'},
status=500)
if not paths_contain(settings.DIRECTORY_WHITELIST,
share.get_realpath()):
raise Exception('Share has an invalid root path: %s' %
share.get_realpath())
path = kwargs.get(self.path_param, None)
if path is not None:
test_path(path)
if share:
full_path = os.path.join(share.get_path(), path)
if not paths_contain(settings.DIRECTORY_WHITELIST,
full_path):
raise Exception('Illegal path encountered, %s, %s' %
(share.get_path(), path))
return f(*args, **kwargs)
def __init__(self, server):
self.server = server
self.user = server.user
self.shares = {}
self.modified_date = {}
for share in Share.user_queryset(self.user,include_stats=False):
self.shares[share.slug_or_id] = share#{'path':share.get_realpath()}
def share_autocomplete(request):
terms = [term.strip() for term in request.GET.get('query').split()]
query = reduce(lambda q,value: q&Q(name__icontains=value), terms , Q())
try:
share_objs = Share.user_queryset(request.user).filter(query).order_by('-created')[:10]
shares = [{'id':s.id,'url':reverse('list_directory',kwargs={'share':s.id}),'name':s.name,'notes':s.notes} for s in share_objs]
return json_response({'status':'success','shares':shares})
except Exception, e:
return json_error([e.message])
def share_autocomplete(request):
terms = [term.strip() for term in request.GET.get('query').split()]
query = reduce(lambda q,value: q&Q(name__icontains=value), terms , Q())
try:
share_objs = Share.user_queryset(request.user).filter(query).order_by('-created')[:10]
shares = [{'id':s.id,'url':reverse('list_directory',kwargs={'share':s.id}),'name':s.name,'notes':s.notes} for s in share_objs]
return json_response({'status':'success','shares':shares})
except Exception, e:
return json_error([e.message])
def wrapped_f(*args, **kwargs):
from bioshareX.models import Share
try:
share = Share.get_by_slug_or_id(kwargs[self.share_param])
except Share.DoesNotExist:
return render(args[0],
'errors/message.html',
{'message': 'No share with that ID exists.'},
status=500)
kwargs[self.share_param] = share
request = args[0]
user_permissions = share.get_user_permissions(request.user)
for perm in self.perms:
if not share.secure and perm in [
'view_share_files', 'download_share_files'
]:
continue
if not perm in user_permissions:
if request.is_ajax():
if not request.user.is_authenticated():
return JsonResponse(
{
'status':
'error',
'unauthenticated':
True,
'errors': [
'You do not have access to this resource.'
]
},
status=status.HTTP_401_UNAUTHORIZED)
return json_error({
'status':
'error',
'unauthenticated':
True,
'errors':
['You do not have access to this resource.']
})
else:
return json_error(
['You do not have access to this resource.'])
else:
if not request.user.is_authenticated():
url = reverse(
'login'
) + '?next=%s' % request.get_full_path()
return redirect(url)
return redirect('forbidden')
return f(*args, **kwargs)
def _get_share(self,path):
parts = path.split(os.path.sep)
if len(parts) < 2:
print 'bad length'
raise PermissionDenied("Received an invalid path: %s"%path)
if not self.shares.has_key(parts[1]) and self.user.id == -1: #Anonymous users don't yet have a dictionary of shares.
try:
share = Share.get_by_slug_or_id(parts[1])
self.shares[share.slug_or_id] = share
except:
pass
if not self.shares.has_key(parts[1]):
print 'no share exists'
print path
raise PermissionDenied("Share does not exist: %s"%path[1])
return self.shares[parts[1]]
def wrapped_f(*args,**kwargs):
from bioshareX.models import Share
share = kwargs.get(self.share_param,None)
if share:
if not isinstance(kwargs[self.share_param], Share):
share = Share.get_by_slug_or_id(share)
if not paths_contain(settings.DIRECTORY_WHITELIST,share.get_realpath()):
raise Exception('Share has an invalid root path: %s'%share.get_realpath())
path = kwargs.get(self.path_param,None)
if path is not None:
test_path(path)
if share:
full_path = os.path.join(share.get_path(),path)
if not paths_contain(settings.DIRECTORY_WHITELIST,full_path):
raise Exception('Illegal path encountered, %s, %s'%(share.get_path(),path))
return f(*args,**kwargs)
def wrapped_f(*args,**kwargs):
from bioshareX.models import Share
share = Share.get_by_slug_or_id(kwargs[self.share_param])
kwargs[self.share_param]=share
request = args[0]
user_permissions = share.get_user_permissions(request.user)
for perm in self.perms:
if not share.secure and perm in ['view_share_files','download_share_files']:
continue
if not perm in user_permissions:
if request.is_ajax():
if not request.user.is_authenticated():
return JsonResponse({'status':'error','unauthenticated':True,'errors':['You do not have access to this resource.']},status=status.HTTP_401_UNAUTHORIZED)
return json_error({'status':'error','unauthenticated':True,'errors':['You do not have access to this resource.']})
else:
return json_error(['You do not have access to this resource.'])
else:
if not request.user.is_authenticated():
url = reverse('login') + '?next=%s' % request.get_full_path()
return redirect(url)
return redirect('forbidden')
return f(*args,**kwargs)
def get_queryset(self):
return Share.user_queryset(self.request.user,include_stats=False).select_related('owner','stats').prefetch_related('tags','user_permissions__user','group_permissions__group')
def get_queryset(self):
shares = Share.user_queryset(self.request.user,include_stats=False)
return ShareLog.objects.filter(share__in=shares)
def get_queryset(self):
return Share.user_queryset(self.request.user,include_stats=False).select_related('owner','stats').prefetch_related('tags','user_permissions__user','group_permissions__group')
def get_queryset(self):
shares = Share.user_queryset(self.request.user,include_stats=False)
return ShareLog.objects.filter(share__in=shares)