class TestCheckSNPs(unittest.TestCase):
def setUp(self):
self.ets = ExcelToSQL("TestCS_COL4A5.xlsx", "Test.db")
df_snps, snp_faults = self.ets.get_snps()
self.cs = CheckSNPs(df_snps)
def test_check_no_snps(self):
checks = self.cs.check_no_snps()
self.assertEqual(checks, 2)
def test_check_rs(self):
checks = self.cs.check_rs()
self.assertEqual(checks, 3)
def test_check_hgvs(self):
checks = self.cs.check_hgvs()
self.assertEqual(checks, 2)
def test_check_all(self):
self.assertEqual(len(self.cs.check_all()), 3)
def setUp(self):
self.ets = ExcelToSQL("TestCS_COL4A5.xlsx", "Test.db")
df_snps, snp_faults = self.ets.get_snps()
self.cs = CheckSNPs(df_snps)
