def test_input_as_lines(self): """Test foldalign stdout input as lines""" f = foldalign(InputHandler='_input_as_lines') res = f(self.input) self.assertEqual(res['ExitStatus'],0) assert res['StdOut'] is not None res.cleanUp()
def test_input_as_lines(self): """Test foldalign stdout input as lines""" f = foldalign(InputHandler='_input_as_lines') res = f(self.input) self.assertEqual(res['ExitStatus'], 0) assert res['StdOut'] is not None res.cleanUp()
def test_get_result_path(self): """Tests foldalign result path""" f = foldalign(InputHandler='_input_as_lines') res = f(self.input) self.assertEqualItems(res.keys(),['StdOut','StdErr','ExitStatus']) self.assertEqual(res['ExitStatus'],0) assert res['StdOut'] is not None res.cleanUp()
def test_get_result_path(self): """Tests foldalign result path""" f = foldalign(InputHandler='_input_as_lines') res = f(self.input) self.assertEqualItems(res.keys(), ['StdOut', 'StdErr', 'ExitStatus']) self.assertEqual(res['ExitStatus'], 0) assert res['StdOut'] is not None res.cleanUp()
def test_input_as_string(self): """Test foldalign stdout input as string""" f = foldalign() t = open('/tmp/single.col','w') t.write('\n'.join(self.input)) t.close() res = f('/tmp/single.col') self.assertEqual(res['ExitStatus'],0) assert res['StdOut'] is not None res.cleanUp() remove('/tmp/single.col')
def test_input_as_string(self): """Test foldalign stdout input as string""" f = foldalign() t = open('/tmp/single.col', 'w') t.write('\n'.join(self.input)) t.close() res = f('/tmp/single.col') self.assertEqual(res['ExitStatus'], 0) assert res['StdOut'] is not None res.cleanUp() remove('/tmp/single.col')