def __init__(self, outDir, genomes, primaryKeyColumn, sizes, augustusGps, annotationGp):
     Target.__init__(self)
     self.outDir = outDir
     self.bedDir = os.path.join(self.outDir, "bedfiles")
     self.bigBedDir = os.path.join(self.outDir, "bigBedfiles")
     self.genomes = genomes
     self.primaryKeyColumn = primaryKeyColumn
     self.augustusGps = augustusGps
     self.sizes = sizes
     self.annotationGp = annotationGp
     self.augustusCategories = functions_in_module(src.augustusQueries)
Пример #2
0
 def __init__(self, outDir, genomes, primaryKeyColumn, sizes, augustusGps,
              annotationGp):
     Target.__init__(self)
     self.outDir = outDir
     self.bedDir = os.path.join(self.outDir, "bedfiles")
     self.bigBedDir = os.path.join(self.outDir, "bigBedfiles")
     self.genomes = genomes
     self.primaryKeyColumn = primaryKeyColumn
     self.augustusGps = augustusGps
     self.sizes = sizes
     self.annotationGp = annotationGp
     self.augustusCategories = functions_in_module(src.augustusQueries)
 def __init__(self, outDir, genomes, primaryKeyColumn, sizes, gps, annotationGp):
     Target.__init__(self)
     self.outDir = outDir
     self.bedDir = os.path.join(self.outDir, "bedfiles")
     self.bigBedDir = os.path.join(self.outDir, "bigBedfiles")
     self.genomes = genomes
     self.primaryKeyColumn = primaryKeyColumn
     self.gps = gps
     self.sizes = sizes
     self.annotationGp = annotationGp
     self.categories = functions_in_module(src.queries)
     # bring in abstractClassifier colors
     self.colors = AbstractClassifier.colors
Пример #4
0
 def __init__(self, outDir, genomes, primaryKeyColumn, sizes, gps,
              annotationGp):
     Target.__init__(self)
     self.outDir = outDir
     self.bedDir = os.path.join(self.outDir, "bedfiles")
     self.bigBedDir = os.path.join(self.outDir, "bigBedfiles")
     self.genomes = genomes
     self.primaryKeyColumn = primaryKeyColumn
     self.gps = gps
     self.sizes = sizes
     self.annotationGp = annotationGp
     self.categories = functions_in_module(src.queries)
     # bring in abstractClassifier colors
     self.colors = AbstractClassifier.colors