def save_model(path, model):
"""Save a full model in directory path (try to create if necessary)."""
if not isinstance(model, base_objects.Model):
raise ValueError("Object %s is not a valid Model" % repr(model))
if not isinstance(path, str):
raise ValueError("Object %s is not a path string" % repr(path))
if not os.path.isdir(path):
logger.warning("Path %s does not exist, try to make it..." % str(path))
try:
os.mkdir(path)
except IOError as xxx_todo_changeme:
(errno, strerror) = xxx_todo_changeme.args
logger.error("I/O error (%s): %s" % (errno, strerror))
return None
print("Saving particles...", end=' ')
files.write_to_file(os.path.join(path, 'particles.py'), save_particles,
model['particles'])
print("%i particles saved to %s" %
(len(model['particles']), os.path.join(path, 'particles.py')))
print("Saving interactions...", end=' ')
files.write_to_file(os.path.join(path, 'interactions.py'),
save_interactions, model['interactions'])
print("%i interactions saved to %s" %
(len(model['interactions']), os.path.join(path, 'interactions.py')))
def save_to_file(filename, object):
"""Save any Python object to file filename"""
if not isinstance(filename, str):
raise SaveObjectError, "filename must be a string"
files.write_to_file(filename, pickle_object, object)
return True
else:
fsock.write(str(inter))
fsock.write("]")
def save_model(path, model):
"""Save a full model in directory path (try to create if necessary)."""
if not isinstance(model, base_objects.Model):
raise ValueError, "Object %s is not a valid Model" % repr(model)
if not isinstance(path, str):
raise ValueError, "Object %s is not a path string" % repr(path)
if not os.path.isdir(path):
logger.warning("Path %s does not exist, try to make it..." % str(path))
try:
os.mkdir(path)
except IOError, (errno, strerror):
logger.error("I/O error (%s): %s" % (errno, strerror))
return None
print "Saving particles...",
files.write_to_file(os.path.join(path, "particles.py"), save_particles, model["particles"])
print "%i particles saved to %s" % (len(model["particles"]), os.path.join(path, "particles.py"))
print "Saving interactions...",
files.write_to_file(os.path.join(path, "interactions.py"), save_interactions, model["interactions"])
print "%i interactions saved to %s" % (len(model["interactions"]), os.path.join(path, "interactions.py"))
if not isinstance(model, base_objects.Model):
raise ValueError, \
"Object %s is not a valid Model" % repr(model)
if not isinstance(path, str):
raise ValueError, \
"Object %s is not a path string" % repr(path)
if not os.path.isdir(path):
logger.warning("Path %s does not exist, try to make it..." % str(path))
try:
os.mkdir(path)
except IOError, (errno, strerror):
logger.error("I/O error (%s): %s" % (errno, strerror))
return None
print "Saving particles...",
files.write_to_file(os.path.join(path, 'particles.py'),
save_particles,
model['particles'])
print "%i particles saved to %s" % (len(model['particles']),
os.path.join(path, 'particles.py'))
print "Saving interactions...",
files.write_to_file(os.path.join(path, 'interactions.py'),
save_interactions,
model['interactions'])
print "%i interactions saved to %s" % (len(model['interactions']),
os.path.join(path, 'interactions.py'))
