def __init__(self, *args):
""" Initialize ECG node. """
super().__init__(*args)
# Append function handles to the metric_functions-list
self.metric_functions.append(self.calculate_blinks)
self.metric_functions.append(self.calculate_blinkrate)
def calculate_blinks(self, x, fs=500):
""" Calculate the number of blinks that occured in the specified
time-window.
"""
blinks = blink_utilities.find_blinks(x['data'][0], fs)
number_of_blinks = blink_utilities.calculate_blinks(blinks)
return number_of_blinks
def calculate_blinkrate(self, x, fs=500):
""" Calculate the blink-rate in the specified time-window
"""
blinks = blink_utilities.find_blinks(x['data'][0], fs)
number_of_blinks = blink_utilities.calculate_blinks(blinks)
return number_of_blinks / (x['time'][0][0] - x['time'][0][-1])
# Run the node from command line
if __name__ == '__main__':
node = mu.midas_parse_config(BlinkNode, sys.argv)
if node:
node.start()
node.show_ui()
#!/usr/bin/env python3 import sys from midas import utilities as mu from midas.dispatcher import Dispatcher # Run the dispatcher dp = mu.midas_parse_config(Dispatcher, sys.argv) dp.start()
from midas import utilities as mu
import qe_utils
# ------------------------------------------------------------------------------
# Create an Activity Node based on the Base Node
# ------------------------------------------------------------------------------
class QENode(BaseNode):
""" MIDAS Activity Node """
def __init__(self, *args):
""" Initialize example node. """
super().__init__(*args)
self.metric_functions.append(qe_utils.current_app)
self.metric_functions.append(qe_utils.idle_time)
self.metric_functions.append(qe_utils.net_stat_sent)
self.metric_functions.append(qe_utils.net_stat_recv)
self.metric_functions.append(qe_utils.system_info)
# ------------------------------------------------------------------------------
# Run the node if started from the command line
# ------------------------------------------------------------------------------
if __name__ == '__main__':
node = mu.midas_parse_config(QENode, sys.argv)
if node is not None:
node.start()
node.show_ui()
# ------------------------------------------------------------------------------
# EOF
# ------------------------------------------------------------------------------
def __init__(self, *args):
""" Initialize ECG node. """
super().__init__(*args)
# Append function handles to the metric_functions-list
self.metric_functions.append(self.calculate_blinks)
self.metric_functions.append(self.calculate_blinkrate)
def calculate_blinks(self, x, fs=500):
""" Calculate the number of blinks that occured in the specified
time-window.
"""
blinks = blink_utilities.find_blinks(x['data'][0], fs)
number_of_blinks = blink_utilities.calculate_blinks(blinks)
return number_of_blinks
def calculate_blinkrate(self, x, fs=500):
""" Calculate the blink-rate in the specified time-window
"""
blinks = blink_utilities.find_blinks(x['data'][0], fs)
number_of_blinks = blink_utilities.calculate_blinks(blinks)
return number_of_blinks / (x['time'][0][0] - x['time'][0][-1])
# Run the node from command line
if __name__ == '__main__':
node = mu.midas_parse_config(BlinkNode, sys.argv)
if node:
node.start()
node.show_ui()
class ECGNode(BaseNode):
def __init__(self, *args):
""" Initialize ECG node. """
super().__init__(*args)
# Append function handles to the metric_functions-list
self.metric_functions.append(self.mean_hr)
self.metric_functions.append(self.rmssd)
def mean_hr(self, x, fs=500):
""" Calculate the average heart rate
from the raw ECG signal x by first
obtaining the RR-intervals using
R-peak detection.
"""
rr = ecg_utilities.detect_r_peaks(x['data'][0], fs)
return ecg_utilities.hrv_mean_hr(rr)
def rmssd(self, x, fs=500):
""" Calculate RMSSD from the RR-vector. """
rr = ecg_utilities.detect_r_peaks(x['data'][0], fs)
return ecg_utilities.hrv_rmssd(rr)
# Run the node from command line
if __name__ == '__main__':
node = mu.midas_parse_config(ECGNode, sys.argv)
if node:
node.start()
node.show_ui()
#!/usr/bin/env python3
import sys
from midas.node import BaseNode
from midas import utilities as mu
import numpy as np
class LumiNode(BaseNode):
def __init__(self, *args):
""" Initialize example node. """
super().__init__(*args)
self.metric_functions.append(self.mean_luminance)
def mean_luminance(self, x):
""" Returns the average luminance """
return np.mean(x['data'][0])
if __name__ == '__main__':
node = mu.midas_parse_config(LumiNode, sys.argv)
if node is not None:
node.start()
node.show_ui()
import sys
from midas.node import BaseNode
from midas import utilities as mu
import numpy
# IoT light-level processing node
class IoTNode(BaseNode):
def __init__(self, *args):
""" Initialize ECG node. """
super().__init__(*args)
# Append function handles to the metric_functions-list
self.metric_functions.append(self.mean_lightlevel)
def mean_lightlevel(self, x):
""" Get the mean light level of the specified time-window from the
sensor
"""
return numpy.mean(x['data'][0])
# Run the node from command line
if __name__ == '__main__':
node = mu.midas_parse_config(IoTNode, sys.argv)
if node:
node.start()
node.show_ui()
Returns:
c <float>: average power in frequency band f_lim1 - f_lim2
"""
f, P = scipy.signal.welch(x['data'][0], fs=self.sampling_rate)
c = np.mean(P[np.bitwise_and(f >= f_lim1, f <= f_lim2)])
return c
# Metrics can handle multiple channels as well. If multiple channels are passed
# to the metric they appear as a list under 'data' key in the input dict. This
# function iterates through all the channels in the input dict.
def metric_d(x):
""" Normalizes the last sample of each channel given as input."""
d = []
for ch in x['data']:
d.append(ch[-1] / np.max(ch))
return d
# -----------------------------------------------------------------------------
# Run the node if started from the command line
# -----------------------------------------------------------------------------
if __name__ == '__main__':
node = mu.midas_parse_config(NodeExampleB, sys.argv)
if node is not None:
node.start()
node.show_ui()
# -----------------------------------------------------------------------------
# EOF
# -----------------------------------------------------------------------------
#!/usr/bin/env python3
import sys
from midas.node import BaseNode
from midas import utilities as mu
import numpy as np
import scipy.signal
class ACCNode(BaseNode):
def __init__(self, *args):
""" Initialize example node. """
super().__init__(*args)
self.metric_functions.append(self.find_peaks)
def find_peaks(self, x):
""" Find peaks in the input data """
return np.mean(x['data'][0])
if __name__ == '__main__':
node = mu.midas_parse_config(ACCNode, sys.argv)
if node is not None:
node.start()
node.show_ui()
import sys
from midas.node import BaseNode
from midas import utilities as mu
import numpy as np
import scipy.signal
class MyoNode(BaseNode):
def __init__(self, *args):
""" Initialize example node. """
super().__init__(*args)
self.metric_functions.append(self.emg_power)
def emg_power(self, x):
""" Returns the average power of the EMG signal """
power = []
for data in x['data']:
f, p = 10*np.log10(scipy.signal.welch(data, fs=50.0))
power.append(np.mean(p[np.bitwise_and(f >= 10.0, f <= 25.0)]))
return power
if __name__ == '__main__':
node = mu.midas_parse_config(MyoNode, sys.argv)
if node is not None:
node.start()
node.show_ui()
# Push standard deviation to 2nd secondary data channel
self.push_sample_secondary(1, time_stamp, new_value2)
# Sleep until next sample (note: for accurate timing you don't want
# to use time.sleep)
time.sleep(1.0)
# Metric functions can also exist outside the class as long as they are added
# to the metric_functions-list in node __init__. These "outside" functions have,
# however, no access to class attributes. Note that it is also possible to
# include metric functions from a completely separate module.
def metric_b(x, arg1=0, arg2=0):
""" Returns 'metric b'. Takes two additional arguments."""
b1 = np.max(x['data'][0]) - arg1
b2 = np.min(x['data'][0]) - arg2
b = (b1, b2)
return b
# ------------------------------------------------------------------------------
# Run the node if started from the command line
# ------------------------------------------------------------------------------
if __name__ == '__main__':
node = mu.midas_parse_config(NodeExampleA, sys.argv)
if node is not None:
node.start()
node.show_ui()
# ------------------------------------------------------------------------------
# EOF
# ------------------------------------------------------------------------------
import sys
from midas.node import BaseNode
from midas import utilities as mu
import activity_utils
# ------------------------------------------------------------------------------
# Create an Activity Node based on the Base Node
# ------------------------------------------------------------------------------
class ActivityNode(BaseNode):
""" MIDAS Activity Node """
def __init__(self, *args):
""" Initialize example node. """
super().__init__(*args)
self.metric_functions.append(activity_utils.current_app)
self.metric_functions.append(activity_utils.idle_time)
# ------------------------------------------------------------------------------
# Run the node if started from the command line
# ------------------------------------------------------------------------------
if __name__ == '__main__':
node = mu.midas_parse_config(ActivityNode, sys.argv)
if node is not None:
node.start()
node.show_ui()
# ------------------------------------------------------------------------------
# EOF
# ------------------------------------------------------------------------------
