def test_freesurfer_wm_mask_eq_to_cmtk_freesurfer_wm_mask(self):
my_fs = fs.load(self.freesurfer_dir)
import nibabel
cmtk_wm_mask = nibabel.load(self.cmtk_wm_mask_path)
assert (my_fs.wm_mask.get_data() == cmtk_wm_mask.get_data()).all()
def test_freesurfer_has_node_info(self):
my_fs = fs.load(self.freesurfer_dir)
assert my_fs.node_info.node[str(82)]['name'] == 'Left-Amygdala'
def test_freesurfer_rois_eq_to_cmtk_freesurfer_rois(self):
my_fs = fs.load(self.freesurfer_dir)
import nibabel
cmtk_fs_rois = nibabel.load(self.cmtk_rois_path)
assert (my_fs.roi_img.get_data() == cmtk_fs_rois.get_data()).all()
