def test_basic(self): report = run_to_report(self.subreads, self.barcodes, subreads=False) d = report.to_dict() self.assertIsNotNone(d) log.info(pformat(d)) log.info(str(report.tables[0]))
def test_basic(self): report = run_to_report(self.bas_h5_fofn, self.barcode_h5_fofn, subreads=True) d = report.to_dict() self.assertIsNotNone(d) log.info(pformat(d)) log.info(str(report.tables[0]))
def test_basic(self): report = run_to_report(self.subreads, self.barcodes, subreads=True) d = report.to_dict() self.assertIsNotNone(d) self.assertEqual(report.tables[0].columns[0].values, ['0--0', '2--2']) self.assertEqual(report.tables[0].columns[1].values, [1, 1]) self.assertEqual(report.tables[0].columns[2].values, [1436, 204])